Pandoraea thiooxydans: ABW99_18700
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Entry
ABW99_18700 CDS
T03947
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABW99_18700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_18700
Enzymes [BR:
ptx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABW99_18700
DNA repair and recombination proteins [BR:
ptx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABW99_18700
Prokaryotic type
ABW99_18700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKJ70706
UniProt:
A0A0G3F103
LinkDB
All DBs
Position
complement(364724..365488)
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AA seq
254 aa
AA seq
DB search
MPRQQDLFDAPSTPSALPLRAQFESLSAEWRALLAPFMRSPAYDELCDFVDAQRAAGKQI
YPDDVFHALRVTSPDAVKVIILGQDPYHGEENGVPQAHGLAFSVRPGIRVPPSLRNIYKE
IERDLHIAAPGHGYLETWASQGVLLLNTVLTVERAQAASHAKRFKNGGWEACTDCLLREL
SKHRKALVCLLWGSHAQAKAPLLAGNGHLLLEAPHPSPLSAHRGFLGCGHFSAVNRHLAS
VGATPIDWRIAPLP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgacaacaagatctgttcgacgccccatcgacgccgtccgcgttgccgctgcga
gcgcaattcgaatcgctatcggccgagtggcgcgcactgctcgcgccattcatgcgcagc
cccgcttacgatgagttatgcgacttcgtcgacgcccagcgggcagccggcaaacagatc
tatccagacgacgtatttcatgcgttgcgcgtcacctcgcccgatgccgtcaaggtcatc
atcctcggccaggacccgtatcacggcgaagagaatggcgtgccacaggcccatggcctg
gccttttcggtacgccccggcattcgcgtgccgccatcactgcgcaatatctacaaggaa
atcgaacgggatctgcatatcgctgcaccagggcacggctatctggagacctgggcgagc
cagggcgtgctgctgctcaataccgtgctgacggtcgagcgcgctcaggcggcgagtcac
gccaagcgcttcaagaatgggggatgggaggcatgcaccgactgcctgctgcgcgagttg
tcgaagcatcgcaaggcactggtgtgtctattgtggggctctcacgcgcaagccaaggcg
ccgctgcttgccggcaatggtcacttgctgctcgaggcgccgcatccttcgccgttgtcg
gcgcatcgcggctttttgggttgcggccatttcagcgccgtcaatcggcatctggccagt
gtgggcgccacgcccatcgactggcgcatcgcaccgctgccctaa
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