Pandoraea thiooxydans: ABW99_19510
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Entry
ABW99_19510 CDS
T03947
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx00061
Fatty acid biosynthesis
ptx00071
Fatty acid degradation
ptx01100
Metabolic pathways
ptx01212
Fatty acid metabolism
ptx02024
Quorum sensing
ptx04146
Peroxisome
Module
ptx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABW99_19510
00071 Fatty acid degradation
ABW99_19510
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABW99_19510
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABW99_19510
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptx01004
]
ABW99_19510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptx04147
]
ABW99_19510
Enzymes [BR:
ptx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABW99_19510
Lipid biosynthesis proteins [BR:
ptx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABW99_19510
Exosome [BR:
ptx04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABW99_19510
Exosomal proteins of breast cancer cells
ABW99_19510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AKJ70069
UniProt:
A0A0G3EVM5
LinkDB
All DBs
Position
complement(540014..541567)
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AA seq
517 aa
AA seq
DB search
MRAPDPAQMLDDIPALLAALPPRIGQLAHRIAAVAPERPALREDERELTYGQLAAAVDAV
SERLREAGVRPGDRVMLVNENCAALVILLLATSNLGAWSLVANARLSAAEIDAIQSHARA
RLTLYTTGISPDALAHAQRHQATPAEWADLGTGQVALGPLNLDCVPEPTSPDPAQQCAAL
IYTTGTTGHPKGVMLSHRNLLFIAAVSSLLRRVTGNDRVYAVLPISHVYGLASVCLGTLY
AGGTLRLVPRFDPARVLHALANEGVTIFQGVPAMHAKLLEHLDAQQRPLDAPRLRFIYSG
GSPLDQTLKARAEARYGLPLHNGYGMTESSPTISQTRLDAPCTDCSVGPLIPGVEARLAD
GDAQIGELWVRGPNVMLGYYRDPAQTRAALSADGWLKTGDMARFDEHGNLHIVGRRKELI
IRSGFNVYPAEVEQALNSHPAVLQSAVIGRPVEGNEEVVAFVELKPGAPALADEAALGAW
ASERLAPYKRPAEIRIVERLPAAATGKILKHRLRDLL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgcccgatcccgcccagatgcttgacgacatccctgccctgctggccgccctg
ccgccccgtatcgggcaacttgcgcatcgcatcgccgccgtggcgcccgagcgcccagcg
ttgcgcgaggacgaacgcgaactcacttatggccaattggccgcagccgtcgacgcagtc
agcgagcggctgcgcgaggcgggcgtacgcccgggcgatcgtgtcatgctcgtcaacgaa
aactgcgcggcgctggtgatcctgttgctggccacgtcaaatctgggcgcctggtcgttg
gtcgccaacgcacgcctgtcagccgccgagatcgatgccatccaatcgcacgcgcgggcg
cggctgacgctctacacaaccggaatctcgccggacgcactcgctcacgcgcagcgtcat
caggcaacgccggccgaatgggccgatctcggcaccggccaggtggcgctcggcccgctc
aatctcgactgtgtgccggaaccgacctcgcccgaccccgctcaacaatgcgcggcactg
atctatacgacgggcaccacgggtcaccccaagggggtgatgctgtcgcaccgtaacctg
ctgttcatcgctgcggtatcgagcttgctgcggcgcgtcaccggcaacgatcgggtgtac
gccgtgctgccgatctcgcatgtctatggacttgcctcggtatgcctgggtaccctctac
gccggcggcacgctgcggctggtgccgcgtttcgacccggcccgcgtgctgcatgcgctg
gcaaacgagggagtcacgatcttccagggggtgccggccatgcatgccaagctgctggaa
cacctggacgcgcagcaacgcccgttggacgcgccgcgattacgctttatctattccggc
ggctcaccgctcgaccaaacgctgaaggcgcgcgccgaggcgcgctacggcctgccgctg
cacaacggctacggcatgaccgaaagcagtccgacgatttcccagacccggctcgacgcg
ccgtgcaccgactgctcggtgggaccgctcatccccggcgtcgaggcgcgtctggccgat
ggcgacgcacagatcggcgaactatgggtacggggtcccaacgtcatgctgggctactac
cgcgacccggcgcagacccgggccgcgctgagcgccgatggctggctgaaaaccggcgat
atggcgcgcttcgacgagcacggcaacctgcacatcgtcgggcgtcgcaaagagttgatc
atccgttcgggcttcaatgtctatccggccgaagtcgagcaggcgctcaacagccatccg
gccgtgctgcagtcggccgtgatcggccgtccggtggagggtaacgaggaggtcgtggcg
ttcgtcgagctcaagcctggcgccccggcgctggcagacgaagcggcactcggggcctgg
gccagcgaacgcctggcgccctacaagcgccccgccgaaattcgtatcgtcgagcgcctg
ccagccgcggcaaccggcaagatactcaaacacaggctgcgcgacctgctgtga
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