Ectopseudomonas toyotomiensis: JWV26_02550
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Entry
JWV26_02550 CDS
T07285
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18295
membrane fusion protein, multidrug efflux system
Organism
pty
Ectopseudomonas toyotomiensis
Module
pty_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pty02000
]
JWV26_02550
01504 Antimicrobial resistance genes [BR:
pty01504
]
JWV26_02550
Transporters [BR:
pty02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JWV26_02550
Antimicrobial resistance genes [BR:
pty01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
JWV26_02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
BMFP
DUF4398
NdhS
OEP
Motif
Other DBs
NCBI-ProteinID:
QSL93269
UniProt:
A0ABD7DY38
LinkDB
All DBs
Position
582814..583974
Genome browser
AA seq
386 aa
AA seq
DB search
MSTIRGRYVFSVVALLAAIGLAGCDKGEQGGGEAPPREVDVLTVKTEPFTVIAELPGRIE
PVRVAEVRARVAGIVLKRTFEEGADVKAGDLLFQIDPAPFKAALSRAQGELARAEAQLFQ
AQATVKRYEPLVKIDAVSKQDFDVAKAALQSAQADKRSAQASVETARLDLGYAEVRAPIA
GRIGRAQVTEGALVGQGEATLLARIQQLDPVYADFTQPAADALRLRAAIADGKVAGAADQ
PLSLRVDGTDIESKGTLLFTDISVDRSTGQIALRGRFDNPQGVLLPGMYVRVLTPQGLNQ
NAILVPQRAVQRAADGQASVMLLGEDDTVEVRQVTTGAMHGSRWLIAEGLAAGEKVITSS
LAAIKPGAKVVPREEADAHAPQSQAQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaattcgcggacgttacgttttttcagtggtcgctctactggcggcaatcggc
ctggccggctgcgacaaaggcgagcaaggagggggtgaggcgccaccacgcgaggtcgac
gtgctgaccgtcaagaccgagccgttcaccgtgatcgccgaactgccaggccgaatcgag
ccggtgcgggtcgccgaagtacgcgcccgggtcgccggcatcgtgctcaaacgcaccttc
gaggaaggcgccgacgtcaaggccggcgacctgctgttccagatcgacccggcaccgttc
aaggccgccctgtcgcgtgctcagggcgaactggcccgcgccgaggcgcagctgttccag
gcgcaggccacggtcaagcgctacgagccactggtgaagatcgatgcggtcagcaagcag
gacttcgatgtcgccaaggctgccctgcaaagcgcccaggccgacaagcgctcggcacaa
gccagcgtggaaaccgcgcggctggatctgggttatgccgaagtgcgcgcgcccattgcc
ggacgcatcggccgcgcccaggtgaccgaaggcgcgctggtcggccagggtgaggccacc
ctgctcgcccgcattcagcagctcgacccggtctacgccgacttcacccagccggccgcc
gatgccctgcgtctgcgcgccgccatcgccgatggcaaggttgccggtgcagccgatcag
cccttgtcgctgcgcgtcgatggcaccgatatcgagagcaaaggcaccctgctattcacc
gatatctcggtggatcgcagcaccggccagatcgccctgcgcggccgcttcgacaacccg
caaggcgtgctgctgccgggcatgtacgtgcgtgtgctgacgccgcaggggctgaaccag
aacgccatcctggtgccgcagcgtgccgtgcagcgtgctgccgacggccaggccagcgtg
atgctgctgggcgaagacgacaccgtcgaggttcgccaggtcaccaccggcgccatgcac
ggctcacgctggctgatcgccgaaggcctcgcggccggcgaaaaggtgatcaccagctcg
ctggctgccatcaagcccggcgccaaggtcgtgccgcgcgaggaagctgacgcgcacgct
ccacaatcccaggcgcagtaa
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