Ectopseudomonas toyotomiensis: JWV26_04525
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Entry
JWV26_04525 CDS
T07285
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pty
Ectopseudomonas toyotomiensis
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pty03400
]
JWV26_04525 (sbcD)
DNA repair and recombination proteins [BR:
pty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWV26_04525 (sbcD)
Archaeal homologous recombinant proteins
JWV26_04525 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QSL93638
LinkDB
All DBs
Position
complement(1001500..1002714)
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AA seq
404 aa
AA seq
DB search
MRILHTSDWHLGQHFMGKTRQAEHQAFCAWLLEQVHVHDVDVLLIAGDVFDTGAPPSYAR
EQYYRLVVELRDAGCALVVLGGNHDSPAMLGESRSLLAQLGTQVVPSVCVDLAEQVLVLN
DRTGQPGAVLCAIPFIRPRDVLASQAGQSAQDKQQSLQQAIAEHYRALYELAASKRDELG
LTLPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGLEH
IRYSGSPIALSFDEARQQKEVLLLTFEGATLQSITPLPVPVFQPMASLRGSLKELAGAIA
EVAAQGTPERLVWLEVQVSTDDYLSDLQSRINALCEGHPVEVLRIRRERGNASASLASEA
RETLDELSVEDVFVRRLQQEALAEDDSQRLQALYRQVLESLPGT
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgcacacctccgactggcatctgggccagcatttcatgggcaagactcgg
caggccgaacaccaggccttttgcgcctggctgctggaacaggttcatgtgcacgacgtg
gacgtgctgctgatcgctggcgacgtattcgacactggcgcgccgcccagttacgcccgc
gagcagtactaccggctggtggttgagctgcgcgacgccggctgcgccctggtcgtactg
ggcggcaaccacgactcaccggccatgctcggtgaaagccgcagcctgctggcgcaactg
ggtacccaggtggtgccgagcgtgtgtgtcgatctggccgaacaggtactggtgctcaat
gatcgtactggccagccgggcgccgttctctgcgccattcccttcattcgtccgcgcgac
gtgctggccagccaggcggggcagagcgcgcaggacaaacagcagtcgttgcagcaagcc
atcgccgagcattaccgggcactgtacgagctggcggcgagcaagcgtgacgagctgggc
ctgacgctaccgatcattgccaccggtcacctcaccacggttggcgccagcgccagtgag
tcggtgcgcgagatctacgtcggcagcctggaggccttccccaccagcgccttcccgccc
gcggactacatcgcccttggccatatccaccgcccgcagaaggtcggcggcctggaacat
atccgctacagcggctcgccgattgcgttgtccttcgacgaggcgcgccagcagaaggaa
gtgctgctgctgacgttcgagggcgccaccttgcagtccatcacgccactgcccgtgccg
gtcttccagcccatggccagcctgcgcggctcgctcaaggaactggccggcgctatcgcc
gaagtagctgctcagggcacgcccgagcggctcgtatggctggaagtgcaagtgagcact
gacgattacctgagtgatctgcaaagccgcatcaacgccctgtgtgaagggcatccggtt
gaggtgctgcgcatccgccgtgagcgcggcaacgccagcgccagcctggccagcgaagcg
cgggagacgctggatgaactgtcggtggaggacgtcttcgtgcgccgtctgcaacaggaa
gcgctggctgaggacgatagtcagcgcttgcaagcgttgtatcggcaggtactggagtcg
ctgccaggaacctag
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