Ectopseudomonas toyotomiensis: JWV26_05070
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Entry
JWV26_05070 CDS
T07285
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pty
Ectopseudomonas toyotomiensis
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pty03016
]
JWV26_05070 (truB)
Enzymes [BR:
pty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JWV26_05070 (truB)
Transfer RNA biogenesis [BR:
pty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JWV26_05070 (truB)
Prokaryotic type
JWV26_05070 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QSL93736
UniProt:
A0AA42LGS0
LinkDB
All DBs
Position
complement(1116380..1117300)
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AA seq
306 aa
AA seq
DB search
MAQVKRIRRKVDGIILLDKPHGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETVAQLGVTTTTGDAEGDVIERRPVTVGRAEIEALLPRFRGEIK
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLACEGEQARLAVDCSKGTYI
RTLVEDLGQLLGCGAHVAELRRTKAGPFDLTRTVTLEELEAAHAEGGNEALDRFLLPADS
GLQDWPLLQFSEHSAFYWLQGQPVRAPEAPKFGMVRVQDHNGRFIGIGEVSDDGRIAPRR
LIYTGA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggtaaaacgtattcgccgcaaggttgacggcatcatcctgctcgacaagccg
cacggtttcacctccaacgccgcgctgcagaaggtgcgttggctgctcaatgccgagaag
gccggtcacaccggtagcctcgacccgttggccaccggtgtgctgccgctgtgtttcggt
gaggcgaccaagttctcccagtatctgctcgacgccgacaagggctacgagaccgtcgct
cagttgggcgtcaccaccaccactggtgatgccgaaggcgacgtgatcgaacggcgcccg
gtgaccgtcggtcgcgccgagatcgaggcgctgctgccgcgctttcgaggtgaaatcaag
cagataccgccgatgtactcggcgttgaagaaggatggtcagccactctacaagctggct
cgtgcgggtgaagtagtggagcgcgaagcgcgttctgttactattgcgcgcctggaactg
ctggcctgcgaaggcgagcaggcccgcctggcggttgattgcagcaaaggcacttatatc
cgtacgctggtcgaggatctcggccagttgctcggctgcggggcacatgtcgccgagctg
cgccgtaccaaggcgggcccgttcgacctgacgcgcaccgtgacgcttgaagaactggaa
gccgcacacgccgaaggtggtaacgaggcgctggatcgcttcctgctgccggccgatagt
ggtctgcaagactggccgctgctgcagttctccgagcacagcgcgttctactggttgcaa
gggcagccggtacgtgcgccggaagctccgaagttcggcatggtgcgggtgcaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgacgatgggcgtatcgccccgcgtcga
ttgatttataccggtgcgtag
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