Ectopseudomonas toyotomiensis: JWV26_07595
Help
Entry
JWV26_07595 CDS
T07285
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JWV26_07595
09124 Replication and repair
03420 Nucleotide excision repair
JWV26_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pty03021
]
JWV26_07595
03036 Chromosome and associated proteins [BR:
pty03036
]
JWV26_07595
03400 DNA repair and recombination proteins [BR:
pty03400
]
JWV26_07595
Enzymes [BR:
pty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JWV26_07595
Transcription machinery [BR:
pty03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JWV26_07595
Chromosome and associated proteins [BR:
pty03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
JWV26_07595
DNA repair and recombination proteins [BR:
pty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JWV26_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QSL94207
UniProt:
A0ABD7E1D9
LinkDB
All DBs
Position
1647048..1649336
Genome browser
AA seq
762 aa
AA seq
DB search
MSLRIAVRELCEFTAKEGDLDLRFTPSPTAQEGMAGHATVVSRRGPDYVAELPLIGQFEG
LTVSGRADGFDPEFRLLEEIKTHRGDISRIPANHRLLHWAQVKIYGWLLCQELGFEELDL
AVVYFNVMTQQETVFRERHSAASLGEFFALHCRRYIDWARQEQAHQQARNQALEVLEFPY
GEFRHGQRQLAEAVYRAARDGHYLLAQATTGIGKTLGTLFPQLKAMPGQQLDRLFFLSAK
TPGRRLALDALQRLREPETPLRVLEHVARDKACEHPSKACHGDSCPLAKGFYDRLPAARS
AALKERWLDQQAVRNIAIAHGVCPYYLSQELCRWSDVVVCDYNYYFDLGALLHSLTLINQ
WRVCLLVDEAHNLVERGRGMYSAELDQARFKAMCREAPKRLKSVLERVDRHWDQLHREQQ
VPYQVYPLAPDLLLAALGKAVSAITDLLTDQPEGNGGELLSFYLDAMLFCRLAESFGAHS
LFDINRIEAGNGRSYSTLCIRNILPAPFLGPRFEDAHSATLFSATLSPNPYYLDLLGLPE
ETQCLDVASPFSAEQLHVQVVRNLSTRYQHRDASLAPICQLMARQYAERPGNYLAFFSSY
QYLEQVLQELRRDHPQIPVWTQSRQMDEAARQGFIERFQIGGRGIGFAVLGGVFGEGVDL
PGERLIGAFVATLGLAQLNPINEEIRQRMDALFGNGYDYTYLYPGLQKVVQAAGRVIRTP
EDQGVLYLIDDRFARPEVRKLLPTWWQVELLRLPVTLPLLES
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctgcgcatcgccgtgcgcgagctgtgcgagttcaccgccaaggagggtgatctc
gacctgcgcttcaccccctcacccaccgcgcaggagggcatggccgggcacgccacggtg
gtgagccggcgcggcccggattacgttgccgagctgccactgatcggccagttcgagggg
ctgacggtcagtggccgcgctgatggcttcgaccccgagtttcgcctgctggaagagatc
aagacccaccgcggcgacatctcgcgcatcccggccaaccaccgcctgctgcactgggcg
caggtgaagatctacggttggctgctgtgccaggaactgggcttcgaggaactggatctg
gcggtggtgtacttcaacgtcatgacccagcaagaaacggtattccgcgagcgccacagc
gccgcgtcgctgggtgaattcttcgccctgcactgccgccgctatatcgattgggcgcgg
caggaacaggcgcatcagcaggctcgcaaccaggcattggaggtgctggagtttccctac
ggcgaatttcgccatggccagcgacaactggccgaggctgtgtatcgcgctgcgcgtgac
ggccattacctgctggcgcaggccaccaccggcatcggcaagactcttggcaccctgttc
ccgcagctcaaggccatgcccggccagcagctcgaccgcctgttcttcttgagcgccaag
acgccgggccggcgcctggcactggatgccctgcaacgcctgcgcgaaccagaaacgccg
ctgcgcgtgctggaacatgtggcccgcgacaaggcctgcgaacacccgagtaaggcctgc
catggcgactcctgcccgctggccaagggcttctacgaccgcctgccggcagcgcgcagt
gcggcgctcaaggaacgctggctggatcagcaggccgtgcgcaatatcgccatcgcccac
ggcgtgtgcccctactacctgagccaggagctgtgccgctggagcgacgtggtggtgtgc
gactacaactactacttcgacctcggcgccctgctgcacagcctcaccctgatcaaccag
tggcgcgtctgcctgctggtggacgaagcgcacaacctggtggaacgcgggcgcggcatg
tacagcgccgagctggatcaggcgcgcttcaaagccatgtgtcgcgaagcgccgaagcgc
ctgaaaagcgtgctggaacgggtcgaccgccactgggatcaactgcaccgcgagcagcag
gtgccctaccaggtctacccgctggcgccggacttgctgctcgccgcgctgggcaaggcg
gtcagtgccatcaccgacctgcttaccgaccagcccgaaggcaatggcggcgagctgctc
agtttctacctggacgccatgctgttctgccgcctggcggaaagcttcggcgcacattcg
ctgttcgacatcaaccgcatcgaggccggcaacgggcgaagttattcgaccctgtgcatc
cgcaatatcctgccggcgcccttcctcggcccacgctttgaggacgcccacagtgccacg
ctgttctccgctactctcagccccaacccttactacctcgaccttctcggcctgccggaa
gagacccagtgcctggacgtcgcctcgccgttcagcgccgagcaactacacgtgcaggtg
gtgcgtaacctgtcgacccgctaccagcaccgcgacgcctcgctggcgccgatctgccaa
ttgatggcgcgccagtacgccgaacgcccgggcaactacctggcgttcttcagcagctat
caatatctggaacaggtactgcaggagctgcgccgcgaccacccgcagatcccggtatgg
acgcagtcccggcagatggacgaagcggcgcgtcagggctttatcgaacgcttccagatc
ggcggacgcggcatcggcttcgccgtgctcggtggcgtattcggcgaaggtgtggatcta
cccggcgaacgcctgatcggcgccttcgtcgccaccctcggcctggcccagctcaacccg
atcaacgaagaaatccgccaacgcatggacgctctgttcggcaatggctacgactacacc
tacctctaccccggcttgcaaaaggtcgtgcaagccgccggccgggtgatccgcacgccg
gaagaccagggcgtgctctacctgatcgacgaccgcttcgcccgccccgaagtacgcaaa
ctgctgccgacctggtggcaggttgagctgctgcgcttgcccgtcacgctgcctttgctg
gaaagctga
DBGET
integrated database retrieval system
