Ectopseudomonas toyotomiensis: JWV26_08415
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Entry
JWV26_08415 CDS
T07285
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty00521
Streptomycin biosynthesis
pty00523
Polyketide sugar unit biosynthesis
pty00525
Acarbose and validamycin biosynthesis
pty00541
Biosynthesis of various nucleotide sugars
pty01100
Metabolic pathways
pty01110
Biosynthesis of secondary metabolites
pty01250
Biosynthesis of nucleotide sugars
Module
pty_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWV26_08415 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWV26_08415 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JWV26_08415 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWV26_08415 (rfbB)
00525 Acarbose and validamycin biosynthesis
JWV26_08415 (rfbB)
Enzymes [BR:
pty01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JWV26_08415 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QSL94366
UniProt:
A0ABD7E0U4
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Position
1824422..1825483
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AA seq
353 aa
AA seq
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MRILITGGAGFIGSALIRHLIRHTEHEVLNLDKLTYAGNLESLAEVAGNHRYRFVHADIA
DSALVARTLAEFQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYALLESTRAYWQQLDA
ERKAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLYVEDHARALLKVVC
EGKVGETYNIGGHNEQKNLDVVRAICALLEELAPHKPSGVARYEDLITYVQDRPGHDLRY
AIDAGKIERELGWVPQETFDSGLRKTVQWYLDNLDWCRRVQDGSYQGERLGAL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgatcaccggcggtgccggcttcatcggttcggctctgatccgtcatctg
atccgtcacaccgagcatgaagtgctcaacctcgacaaactgacctatgccggcaacctg
gaatcgctcgccgaagtagcgggcaaccaccgttaccgcttcgtccatgccgatatcgcc
gacagcgcgttggtggcacggacactggccgagtttcagcccgacgccatcatgcacctg
gccgccgaatcccacgtcgaccgctccatcgatggcccagccgcctttatccagaccaac
atcgtcggcacctacgccctgctggaaagcacacgcgcctactggcagcagctggacgcc
gaacgcaaggcggccttccgcttccaccatatctccaccgacgaggtctacggcgacctg
cacggggtagatgacctcttcaccgaaaccactccctacgcgcccagctcgccctattcg
gcgagcaaggcggcgtccgaccatctggtgcgagcctggcagcgtacgtacggcctgccg
gtgctgatcaccaactgctcgaacaattacggtccgtaccatttccccgagaagctgatc
ccgctgatgatcctcaacgccctggcgggcaagccgctgccggtgtatggcaacggccag
caggtacgcgactggctctatgtcgaggatcacgcgcgggcgctgctcaaggtggtctgc
gaaggcaaggtgggcgagacctacaatatcggcgggcacaacgagcagaagaatctcgat
gtggtacgcgccatctgcgcactgctggaggaactggcgccgcacaagccgtccggcgtg
gcgcgctatgaagacctgatcacctatgtgcaggatcgcccgggccatgacctgcgctat
gccatcgacgccggcaagatcgaacgcgagctgggctgggtaccacaggaaaccttcgac
agcgggctgcgcaagacggtgcagtggtacctggacaacctcgactggtgccgccgcgtg
caggatggcagttatcagggcgagcggctcggcgcactctag
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