Pseudomonas toyotomiensis: JWV26_11095
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Entry
JWV26_11095 CDS
T07285
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pty
Pseudomonas toyotomiensis
Pathway
pty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWV26_11095 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pty02022
]
JWV26_11095 (algB)
Two-component system [BR:
pty02022
]
NtrC family
KinB-AlgB (alginate production)
JWV26_11095 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
VpsR
cREC_REC
AAA_22
AAA_2
AAA_19
AAA_16
MCM
HTH_29
HTH_23
Tnp_22_trimer
nSTAND3
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QSL94868
LinkDB
All DBs
Position
complement(2408823..2410175)
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AA seq
450 aa
AA seq
DB search
MAVAEQTSGRILLVDDEAAILRTFRYCLEDEGYDVAGASSATQAEALLQRQVFDLCFLDL
RLGEDNGLDLLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCTPDQLRLAA
AKQLEVRTLAARLEALEGEVRKAKDGLDSHSPAMMAILETARQVAATDANILILGESGTG
KGELSRAIHGWSRRAKRTCVTINCPSLTAELMESELFGHARGSFTGASESTQGRVSQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRIVAATNLDLDEMVREGRF
REDLLYRLNVITLKLPPLRERHEDVMGLAERFLARFVSDYGRPACGFSPEAAAALQAYHW
PGNIRELRNVVERASIICQSDVVEVSHLGLGGTGEAPNNAVRVGAAMSLEELEKAHIAAV
LASSNTLDMAAKTLGIDTSTLYRKRKQYNL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgcagagcaaaccagtggacgcattctgctagtggacgacgaagcggcaatc
ctgcgtaccttccgttactgccttgaagacgaaggctatgacgtcgccggcgccagcagt
gcgacccaagccgaggcgctgctgcagcgacaggtgttcgacctttgctttcttgacctg
cgcctgggcgaggacaacggactggacctgttggcgcagatgcgcatccaggcaccctgg
atgcgcgtggtgatcgtcaccgcccactcggccgtggacaccgcggtcgatgccatccag
gccggcgccgccgattatctggtcaaaccctgcacccccgatcaactgcgcctggccgcc
gccaagcaactggaagtgcgtacgttggccgcacgcctggaggctctggaaggtgaggta
cgcaaggccaaggacggcctcgactcgcatagcccggcgatgatggcgattctggaaacc
gcacggcaggtcgctgctaccgacgccaacatcctcatcctcggcgaatccggtaccggc
aagggcgagctatcgcgcgccatccacggctggagccgccgtgccaagcgcacctgcgtg
accatcaactgcccatcgctgacggccgagctgatggaaagcgagctgttcggtcacgcc
cgcggctccttcaccggtgccagcgaaagcacccagggccgcgtcagccaggccgacggc
ggcaccctgttcctcgacgagatcggcgacttcccgctggccctgcaacccaagctgctg
cgcttcattcaggacaaggagtacgagcgcgtcggcgatccggtgacccggcgtgccgat
gtgcgcatcgtcgccgccaccaacctggacctcgacgaaatggtacgcgagggccgcttc
cgtgaagacctgctgtaccgcctcaacgtcatcaccctcaagctgccgccgttgcgcgaa
cgtcacgaagacgtgatgggcctggccgagcgctttctcgcccgcttcgtcagcgactac
gggcgcccggcgtgcggtttcagccccgaggctgccgccgccctgcaggcttatcactgg
ccaggcaatatccgcgagctgcgcaacgtcgtcgagcgcgccagcatcatctgccagagc
gacgtggtggaggttagccatctcggcctgggcggcaccggcgaagcgccgaacaatgcc
gtgcgtgtcggcgcagcgatgagccttgaggagctggaaaaggcgcatattgccgccgtg
ctggccagcagcaacaccctggacatggcggccaagacgctgggtatcgatacctcgacc
ctctatcgcaaacgcaagcagtacaacctctga
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