Ectopseudomonas toyotomiensis: JWV26_11170
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Entry
JWV26_11170 CDS
T07285
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty02020
Two-component system
pty02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWV26_11170
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JWV26_11170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pty03021
]
JWV26_11170
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pty02035
]
JWV26_11170
Transcription machinery [BR:
pty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JWV26_11170
Bacterial motility proteins [BR:
pty02035
]
Flagellar system
Flagellar assembly proteins
Stator
JWV26_11170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HNH_repeat
HTH_38
GerE
Motif
Other DBs
NCBI-ProteinID:
QSL94882
UniProt:
A0ABD7E3E1
LinkDB
All DBs
Position
2425180..2425914
Genome browser
AA seq
244 aa
AA seq
DB search
MNANCAIDYRYAAEQGGAALFAPGAEQKWLLQYLPLVKRIVSQLALQANQVLDREDMEQI
GLMGLLECLRRYGTPDEQFGRFAALRIRGAILDELRRQDWRPRQVRQQTHRIRDAIRQLA
RQLGRVPQEEEILQATGISAKDYQEFLQADACEAIESLDELLQNGHESFACGSSAVEDRV
LKERLLTQALSQLSERERLVLTLYYQHELSLKEIALVLELSDARVCQLSKQAIAKASRYL
NERG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaactgcgccattgactatcgctacgccgccgaacagggcggggctgcgctg
ttcgccccgggggccgagcagaagtggctgttgcagtacctgccgctggtcaagcgcatc
gtcagtcagctggcgttgcaggccaaccaggtgctcgaccgcgaagacatggagcagatc
ggtctgatgggcttgctcgaatgcctgcgccgctatggcacgccggacgagcagttcggt
cgcttcgccgcgctgcgcatccgtggtgcgattctagatgaactgcgccgccaggactgg
cggccgcgccaggtgcgccagcagacccacaggattcgcgacgccattcgccagttggcg
cggcaactgggtcgtgtaccgcaggaagaagagatcctccaggcgaccgggatcagcgcc
aaggactatcaggagtttctccaggccgatgcctgcgaggccatcgaaagcctcgatgag
ctgctgcagaacggccacgagagcttcgcctgtggcagcagtgcggtcgaggaccgcgtg
ctcaaggagcgcctgctgactcaggcactgagccagctcagcgagcgcgaacgactggtg
ctgaccctttactaccaacatgagctgagcctcaaggaaatcgccctggtgctggagctg
agcgacgcgcgcgtctgccagttgagcaagcaggcgatcgccaaggccagtcgctacctg
aacgagagaggctag
DBGET
integrated database retrieval system
