Ectopseudomonas toyotomiensis: JWV26_12010
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Entry
JWV26_12010 CDS
T07285
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty00300
Lysine biosynthesis
pty00470
D-Amino acid metabolism
pty01100
Metabolic pathways
pty01110
Biosynthesis of secondary metabolites
pty01120
Microbial metabolism in diverse environments
pty01230
Biosynthesis of amino acids
Module
pty_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWV26_12010 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWV26_12010 (dapF)
Enzymes [BR:
pty01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JWV26_12010 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QSL95041
UniProt:
A0ABD7E2T1
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All DBs
Position
complement(2602203..2603033)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHIGVGFDQLLIVEPPSHPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKVIRVETKSGIIELRVQNDGQVCVNM
GAPRLQPEQVPFQADQAALTYRVDVEGQSVELAALSMGNPHAVLRVDSVDDAPVHTLGPK
LEHHPRFPQRVNVGFLQVQDRQRARLRVWERGAGETLACGTGACAAAVAAIRQGWMDSPV
QLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctattgcgctttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
atcagtcagcacgcccacgtgcaacccaagcatgccaaacaatggggcgaccgccacatc
ggtgtcggtttcgaccaactgctgatcgtcgagccgccgagtcacccggatgtcgacttc
cgttaccgcatcttcaactccgacggctcggaagttgagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagaaggtcattcgcgtcgag
accaagagcggcatcatcgagctgcgcgtgcagaacgatggccaggtctgcgtcaacatg
ggcgcaccgcgcctgcagccggaacaggtgccgttccaggccgaccaggccgcgctgacc
tatcgcgtcgacgtcgagggccagagcgtcgagctggccgcgctgtcgatgggcaatccg
catgcggtgctgcgcgtcgatagcgtcgatgacgcgccggtgcacacgcttgggccgaaa
ctggaacaccatccgcgcttcccgcagcgggtcaacgtcggctttttgcaggtacaggat
cgtcagcgtgcgcgcctgcgcgtgtgggagcgtggtgccggcgaaaccctggcctgcggc
accggggcctgcgcggcggccgttgcggcaattcgccagggctggatggattcgcccgtg
caactggaactgccaggcggcaaactgtccatcgaatgggcaggcgaaggtcagccggtt
atgatgaccgggcccgctgcccgcgtatacgaaggacaggttcgcctatga
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