Ectopseudomonas toyotomiensis: JWV26_12015
Help
Entry
JWV26_12015 CDS
T07285
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty00300
Lysine biosynthesis
pty00470
D-Amino acid metabolism
pty01100
Metabolic pathways
pty01110
Biosynthesis of secondary metabolites
pty01120
Microbial metabolism in diverse environments
pty01230
Biosynthesis of amino acids
Module
pty_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWV26_12015 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWV26_12015 (lysA)
Enzymes [BR:
pty01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWV26_12015 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSL95042
UniProt:
A0A1I5NXM1
LinkDB
All DBs
Position
complement(2603044..2604291)
Genome browser
AA seq
415 aa
AA seq
DB search
MEAFNYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEGQYRAYADALAGMPHLVCFAVK
ANSNIGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH
CFNVESNVELERLQKVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA
VYARAAELPNLEVIGVDCHIGSQLTTLEPFLDALDRLLLLVDKLAARGITIKHLDLGGGL
GVQYRDEQPPLAGDYITAVRKRLQGRDLGLVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSPVQPREGESRNYDLVGPICETGDFLAKDRQLVLAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttcaactaccgcgacggcgagctgttcgcggaaggcgttgccttgtccgcg
ctggctcagcgcttcggcacgcccacctacgtctattcccgcgcccatatcgaagggcag
taccgcgcctatgccgatgccctggccggcatgccgcacctggtctgcttcgcggtcaag
gccaactccaacatcggcgtgctgaacgtgctggcacgcctcggcgccggcttcgacatc
gtttccagcggtgagctggagcgcgtactggccgccggtggcgagccgagtcgcatcgtc
ttctccggcgttggcaagagccgcgacgacatgcgccgcgcgctggaagtcggcgtgcac
tgcttcaacgtcgagtccaacgtcgagctggagcgcctgcagaaggtcgctgccgagctt
ggcgtcaaagcgcccgtctcgctgcgggtcaatccggacgtggacgccggcacccacccg
tatatttccaccggcctcaaggaaaacaagttcggcatcgacatcgagcaggccgaggcg
gtctatgcccgcgctgccgagctgccgaacctggaagtgatcggcgtcgactgccatatc
ggttcgcagttgaccactctcgaacccttcctcgatgccctggatcgcctgttgctgctg
gtcgacaaactggccgcacgcggtatcaccatcaaacatctggacctcggtggtggcctt
ggcgtgcagtaccgcgacgagcagccgccgctggccggcgactacatcaccgccgtgcgc
aaacgcctgcaaggtcgcgacctgggcctggtattcgaaccgggccgcttcatcgtcgcc
aacgccggcgtactgctgactcaggtggaatacctcaagcacaccgagcacaaggacttc
gccattgtcgatgcggcgatgaacgacctgatccgccccgccctgtatcaggcatggatg
gacgtgtcgccggtgcagccgcgtgaaggcgagtcgcgtaactacgacctggtcggaccg
atctgcgagaccggcgacttcctggccaaggatcgtcagctggtgctggccgagggtgac
ctgctggccgtgcgttcggcgggcgcctatggcttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtagatggcgagcaggcttatgaagtgcgtcgtcgc
gagacagtccaagagctctatgccggcgaaagcctgctgccggcctga
DBGET
integrated database retrieval system