Ectopseudomonas toyotomiensis: JWV26_12585
Help
Entry
JWV26_12585 CDS
T07285
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWV26_12585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pty03019
]
JWV26_12585
03400 DNA repair and recombination proteins [BR:
pty03400
]
JWV26_12585
Enzymes [BR:
pty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWV26_12585
Messenger RNA biogenesis [BR:
pty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JWV26_12585
DNA repair and recombination proteins [BR:
pty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JWV26_12585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QSL90617
UniProt:
A0ABD7DR30
LinkDB
All DBs
Position
2725038..2726966
Genome browser
AA seq
642 aa
AA seq
DB search
MSTLKRVFGFDQLRPGQEAVLSAVLAGRSAAAIFPTGSGKSLCYQLPALHLPHLTLVISP
LLALMQDQLAFLHAHGIAAASIDSAQSREHAAEVMNRARSGELKILMISVERLKNERFRN
FIAQVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFGIKQVLLLTATATPKVIADMR
EKFAILEADVVTTGFYRPNLNLLVEPVAGSAKAQRLQQWLAPRRGQASIVYVTQQKTAEQ
VAERLARDGLAVSAYHAGMAHDVRESIQRRFMAGELECIVATIAFGMGIDKRDIRNVVHF
DLPKSVENYSQEIGRAGRDGQASDCLVLASRDGLSVLENFVYGDTPELAGIRAVLDDLRA
VGTGGQWELMLGQLSELSNIRALPLKTLLVQLELRGIIAPRYAYFAEYRFKLLLEDEALL
AQFEGERRQFVEVILACSKRARTWSTLDFDALYQQYGAERARVVKALDYFQEKGWLELES
KQMTEVYAVLDGDFDVAALANDLHAHFRTHEASEIARIQAMLALFESRECLSRRLALYFG
DAQAPERCGHCSVCQGRVATLPQPPEQPPLSARDAQALCAAFVEKHLQHAGDRPSHECLT
RFLCGVTTPLLTKLKARQLAGFAALEEYPYAEVRGWLAASFA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccctcaaacgtgtcttcggtttcgatcagctgcgtcccggtcaggaagcggtg
ctcagcgccgtactcgccggtcgctcggcggcggcgatctttcctaccggttcgggcaag
tcgctgtgctaccagttgccggccttgcatctgccacacttgaccctggtgatttcgccg
ctactggcgctgatgcaggatcagttggccttcctgcatgcccatggcatcgcggcggcc
agcatcgattcggcgcagagccgcgagcatgccgccgaggtgatgaaccgcgcacgcagc
ggcgaactgaagattctgatgatctcggtggagcgcctgaagaacgagcgcttccgtaat
ttcatcgctcaggtaccgatctcactgttggtggtcgacgaggcgcactgcatttccgag
tggggccacaatttccgccctgactacctcaagctgcccgactatcaacgccagttcggc
atcaagcaggtgctgctgctcaccgccacggccacgcccaaggtgatcgccgacatgcgc
gagaaattcgccatccttgaagcggacgtggtcaccaccggcttctaccggcccaatctc
aacctgctggtggagccagtggcaggctccgccaaggcgcaacgtctgcagcaatggctg
gcgccgcggcgcggccaggcgagcatcgtctacgtcacccagcagaaaactgccgagcag
gtcgccgaacgcctggcgcgtgacggtctggcggtcagcgcctaccacgctggcatggcc
catgacgtacgtgagtcgatccagcgccgtttcatggcaggcgaactggaatgcatcgtc
gccaccatcgccttcggcatgggcatcgacaagcgcgacatccgcaacgtggtgcacttc
gacttgcccaagtcggtggagaactacagccaggaaatcggccgcgccggacgcgatggc
caggcctcggactgcctggtgctggccagccgcgacggtctcagcgtgctggagaacttc
gtctacggcgatacgccggagctcgccggcattcgtgccgtgctcgacgacctgcgcgca
gtcggcacgggcgggcagtgggagctgatgcttggccagttgtcggagctgagcaatatc
cgtgcgctgccgctcaagaccctgctggtgcagctggagctgcgcggcatcatcgcgccg
cgctatgcctacttcgccgagtatcgcttcaagttgctgctggaggatgaggcgctgctg
gcgcagttcgagggcgagcgccgccagttcgtcgaggtcatcctcgcctgctcgaagcgc
gcacgcacctggtcgacgctggacttcgatgccctgtatcagcagtacggcgccgaacgc
gcgcgggtggtcaaggcactggactacttccaggagaagggctggctggagctggaaagc
aagcagatgaccgaggtctatgccgtgctcgatggcgacttcgatgtggcggcgctggcc
aatgatttgcacgcccactttcgcacccacgaggccagtgagattgcccgcatccaggcc
atgctcgccctgttcgagagccgtgaatgcctgagccggcgcctggcgctgtacttcggc
gatgcgcaggcgcccgagcgttgtgggcattgttctgtgtgccagggccgcgtcgctacc
ctgccgcaaccgccagagcagccgccgttgagcgctcgtgatgcgcaggcgctgtgcgcg
gccttcgtcgaaaagcacctgcagcacgccggcgacaggccgagccatgagtgcctgacg
cgctttctctgtggcgtgaccacgccactgttgaccaagctcaaggcgcgccagctggcc
ggtttcgctgcactggaggagtacccctacgccgaggtgcgcggttggttggcggcctcg
tttgcgtag
DBGET
integrated database retrieval system
