Ectopseudomonas toyotomiensis: JWV26_16145
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Entry
JWV26_16145 CDS
T07285
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pty
Ectopseudomonas toyotomiensis
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pty03400
]
JWV26_16145 (phrB)
Enzymes [BR:
pty01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JWV26_16145 (phrB)
DNA repair and recombination proteins [BR:
pty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JWV26_16145 (phrB)
Prokaryotic type
JWV26_16145 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QSL91290
UniProt:
A0ABD7DS19
LinkDB
All DBs
Position
complement(3519754..3521190)
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AA seq
478 aa
AA seq
DB search
MQQLMWFRSDLRTQDNTALSRAMSSGATIALYLVTPGQWQRHDDAASKVDFWLRNLAELS
KALAALNVPLLVRHCHDWSEAPVQVAEVCHEHDISAVHVNEEYGINESLRDQQVCAYLGQ
QAIAWHSHLDQLFFKPGSVLTRSGGYFQVYSQFRKVCYERLHTALPVLIAPPKAQTPLAI
GSDAIPETVEGFATPSANLRLLWPAGEEAALQRLQRFSEEQVTYYKDERDFPAKPGTSQL
SPYLAVGVVSPRQCLHAALAANQGEFDSGNPGVVTWINELLWREFYKHTLVGYPRVSRHR
AFRLETEAVPWRHAPEDLAAWQEGRTGLPIIDAAMRQLLATGWMHNRLRMIVAMFLTKNL
LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPEGQFI
RQWVPELAGLNKRDIHDPSALGGLFAPAGYPRPIVDLSRSRERALTAFKNLSAREVPA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactgatgtggtttcgcagcgacctgcgcacccaggacaacaccgccctgagc
cgcgccatgagcagcggcgcgaccatcgccctgtatctcgtcacgcctggccagtggcag
cgccatgacgatgctgcgagcaaggtggacttctggctgcgcaacctggcggagctgagc
aaggctctggcggcgctcaatgtgccgctgctggtacgccactgccacgattggagcgag
gcgccggtgcaggtcgccgaggtctgccatgaacacgacatcagcgccgtgcatgtcaat
gaggagtacggcatcaacgagagcctgcgcgatcagcaggtctgcgcctacctcggccag
caggccatcgcctggcacagccacctcgatcagctgttcttcaaacctggcagcgtactg
acccgctccggcggctacttccaggtctacagccagttccgcaaggtctgctacgagcgc
ctgcacacggccctgccggtattgatcgcccctccgaaggcgcaaacgccgctggccatc
ggcagtgacgcgatacccgaaaccgtagagggtttcgccacacccagcgccaacctgcgc
ctgctctggcccgccggagaggaggctgccctgcagcgcctgcagcgctttagcgaggag
caggtcacctactacaaggacgaacgcgacttccccgccaagcctggcaccagccagttg
tcgccctacctggccgtcggcgtcgtatcgccgcgccaatgcctgcatgccgcgctcgcg
gccaatcagggcgagttcgacagtggcaacccaggcgttgtcacctggatcaacgagctg
ctctggcgtgagttctacaagcacacactggtcggctacccacgggtatcgcgccaccgt
gccttccgcctggaaaccgaggcggtgccatggcgccacgccccggaagatctggccgcc
tggcaagagggccgcaccggcctgccgatcatcgatgcggccatgcgccaactgctggca
accggctggatgcacaaccgcctgcgcatgatcgtcgccatgttcctgaccaagaacctg
ctgatcgactggcgcgagggcgagcgcttcttcatgcgtcacctgatcgatggcgacctg
gcggcgaacaacggcggctggcaatggagcgcctccaccggtaccgatgcagcgccgtac
ttccgcattttcaacccgatcagccagtcgcagaagttcgatcccgaaggccagttcatt
cgccagtgggtgccagagctggccggcctgaacaagcgcgatattcatgacccgtccgca
ctgggcggcctgttcgcgcccgccggttacccacgcccgatcgtcgatctgtcgcgctcg
cgtgaacgcgccctgacggcgttcaagaacctgtctgcgcgggaggttccggcatga
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integrated database retrieval system
