Ectopseudomonas toyotomiensis: JWV26_16545
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Entry
JWV26_16545 CDS
T07285
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty03030
DNA replication
pty03430
Mismatch repair
pty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWV26_16545
03430 Mismatch repair
JWV26_16545
03440 Homologous recombination
JWV26_16545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pty03032
]
JWV26_16545
03400 DNA repair and recombination proteins [BR:
pty03400
]
JWV26_16545
Enzymes [BR:
pty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWV26_16545
DNA replication proteins [BR:
pty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWV26_16545
DNA repair and recombination proteins [BR:
pty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWV26_16545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QSL91367
UniProt:
A0A1I5MYY0
LinkDB
All DBs
Position
3607121..3608521
Genome browser
AA seq
466 aa
AA seq
DB search
MTAAFAPAATLQGRALAVVEVKTTGAHPARDAIWELAIIQVDAEGCVAERLHWLFEPGVA
LPSQLLSLSGLHPLELRGQPRIESEAQAIAAAIRGRILVGHNLRFSLAFLRRVLPDWNAQ
RPQQLCTQRLARAALPELASAGFDALCAHFGITRFFRDRAVPDAEAVLALARHLLQQVAP
AALGHQLRSAARPPLLAAERFAQLPERPGVYYFLGDGGAQLYVGKSRNLRRRVMSHFQND
HRDRRSLQMVQQIRDVQVAITAGELGALLFESAEIKRLQPLYNRRLRKQRELLTWALAGE
PGDLRIELLQHQALTPGLRQAGLFRSRHHARQWLLEQARQRHLCLRVLGLEEGDGACFAY
QLGRCAGACCGEESRQMHDTRLLASVEHLRTQAWPWSGPVALVERDEQHGLTQWHVLDQW
RHLGTVDRFERVEPLLAKRRGGFNLDTYHILLSHLRRHPNMEIVLL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgacggctgccttcgcaccggccgccacgttgcagggcagggccctggcagtcgtggag
gtgaagaccaccggagcccacccggcacgtgatgccatctgggagctggcgatcatccag
gtcgatgctgagggttgtgtcgcagagcgcttgcactggctgttcgagcctggtgtcgcg
ctgccctcgcagttgctcagcctgagtggtctgcatccactggaattacgcggccagccg
cgtatcgagagcgaggcgcaagcgatagccgctgccattcgcggccgcatactggtgggc
cacaatcttcgattcagtctggcgttcttgcgtcgcgtgctgcctgactggaacgcgcag
cgtccgcaacagctctgcacccagcgcctggccagagcggcgctgccggaactggccagc
gccggcttcgatgcgctatgtgcgcattttggcatcacgcgtttcttccgtgatcgcgcc
gtgccggatgcggaggccgttctggcactggctcggcatttactgcagcaggtcgctccg
gcggcgctggggcatcagttgcgaagcgcagcgcggcctccgttgctggccgcggagcgt
ttcgcccagttgccggaacgtccgggtgtttattacttcctgggcgacggtggtgcgcaa
ctgtatgtgggcaagagccgcaatctgcgccgccgggtgatgtcgcactttcagaacgat
caccgcgaccgccgcagcctgcagatggtgcagcagatccgtgatgtgcaggtggctatc
acggccggtgagctgggggctctgctgttcgagtctgccgagatcaagcgtctgcaaccc
ctgtacaaccgtcgtctgcgcaagcagcgcgagctgttgacctgggcgctggcgggcgag
cctggcgatctgcgcatcgaactgctccagcaccaggctttgacgccagggctcaggcag
gccgggttgttccgctcgcgccatcacgcgcgccagtggctgcttgagcaggcgcggcaa
cgacacctgtgcctgcgtgtcctcggtctggaggagggcgatggtgcctgcttcgcctat
cagcttgggcgctgtgctggcgcctgctgtggcgaggagtcgcgccagatgcacgatacg
cggttgctcgccagcgtcgagcacctgcgaacccaagcctggccatggagcgggccggtc
gcgctggtcgagcgcgacgagcagcacggcctgacccagtggcacgtgctcgatcaatgg
cgccaccttggcacggtagatcgtttcgagcgggtcgagccattactggccaagcgccgt
ggcggcttcaacctcgacacctatcacattctgctcagccacctgcgccgccacccgaac
atggagatcgtgctgctgtga
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