Ectopseudomonas toyotomiensis: JWV26_17095
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Entry
JWV26_17095 CDS
T07285
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pty
Ectopseudomonas toyotomiensis
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pty03009
]
JWV26_17095
Enzymes [BR:
pty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JWV26_17095
Ribosome biogenesis [BR:
pty03009
]
Prokaryotic type
rRNA helicases
JWV26_17095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QSL91473
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All DBs
Position
3717604..3718929
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AA seq
441 aa
AA seq
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MFAQFALHERLLKAVAELNFVEPTPVQAAAIPPALEGKDLRVIAQTGSGKTAAFVLPLLN
RLLGDGSSQQRVSIRALILLPTRELAQQTLKEVERFAQFTFLKAGLVTGGEDFKVQAAMM
RKIDILIGTPGRLIEHANAGNLPLNEVEVLVFDEADRMLDMGFAEDAQRLAEACGPHQTL
LFSATTGGNGLREMVAKVLKDPQHLMLNSVSQLNEGTRQQIITADHNYHKEQLVDWLLTN
EAYDKAIVFTNTRVQADRLYGKLVTAGVKAFVLHGEKDQKDRKLAIDRLRQGAVKVLVAT
DVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAVSLICHTDWNLMSSIER
YLKQRFERRTIKELKGIYQGPKNLKASGKAAGSKKKKTEKKDPKKATASKRKTGPRPAGK
PSVLVSADGSAPLKRKKPAAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcccaattcgccctgcatgaacgcctgctgaaagccgtggccgagcttaacttc
gtcgagccgactccggtgcaggcggcagcgattccgcctgcgctggagggcaaggacctg
cgggtgatcgcccagaccggcagtggcaagaccgccgctttcgtcctgccgttgctcaat
cgcctgctcggtgatggcagctcgcagcagcgcgtgagcattcgtgcactgatcctgcta
ccgacccgcgagttggcgcagcagacgctgaaggaagtcgaacgcttcgctcagttcacc
ttcctcaaggccggcctggtgaccggtggcgaggacttcaaggtgcaagccgcgatgatg
cgcaagatcgatattctgatcggcacgccgggccgtctgatcgagcacgccaacgccggc
aacctgccgctgaacgaggtcgaggtgctggtgttcgacgaggccgaccgcatgctcgac
atgggcttcgccgaggacgcccagcgccttgccgaggcctgcggcccgcaccagaccctg
ctgttctccgctaccaccggcggcaatggcctgcgcgagatggtcgccaaggtgctcaag
gacccgcagcacctgatgctcaacagcgtcagccagctcaatgagggtactcgccagcag
atcatcacggccgaccataactaccacaaggagcaactggtcgactggttgctgaccaac
gaggcctatgacaaggccatcgtcttcaccaacacccgtgtgcaggccgatcgtctctac
ggcaagctggtgaccgccggggtcaaggcgttcgtgctgcatggcgagaaggaccagaag
gatcgcaagctggccatcgaccgcctgcgccagggagccgtcaaggttctggtggccacc
gacgtggccgcgcgcggtctggacgtcgaaggcctggatctggtgatcaacttcgacatg
ccgcgttccggcgatgagtacgtgcaccgcatcggccgtaccggccgcgccgggggcgaa
ggcctggcggtatcgctgatctgccacaccgattggaacctgatgtcgagcatcgagcgc
tacctcaaacagcgtttcgagcgtcgcaccatcaaggagctgaaaggcatctaccagggg
ccgaagaacctcaaggcgtccggcaaggcagctggcagcaagaagaaaaagaccgagaag
aaagacccgaagaaagccaccgcctccaagcgcaagaccggcccgcgtccggctggcaaa
ccttctgtgctggtcagcgccgatggtagcgcgccgctcaagcgcaagaagccggctgct
gaatag
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