Ectopseudomonas toyotomiensis: JWV26_17310
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Entry
JWV26_17310 CDS
T07285
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty00260
Glycine, serine and threonine metabolism
pty00460
Cyanoamino acid metabolism
pty00630
Glyoxylate and dicarboxylate metabolism
pty00670
One carbon pool by folate
pty00680
Methane metabolism
pty01100
Metabolic pathways
pty01110
Biosynthesis of secondary metabolites
pty01120
Microbial metabolism in diverse environments
pty01200
Carbon metabolism
pty01230
Biosynthesis of amino acids
pty01240
Biosynthesis of cofactors
pty04981
Folate transport and metabolism
Module
pty_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWV26_17310
09102 Energy metabolism
00680 Methane metabolism
JWV26_17310
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWV26_17310
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JWV26_17310
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JWV26_17310
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JWV26_17310
Enzymes [BR:
pty01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JWV26_17310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QSL91512
LinkDB
All DBs
Position
complement(3758261..3759514)
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AA seq
417 aa
AA seq
DB search
MFSKHDQLQGYDDALLAAIQAEEQRQEDHIELIASENYCSQRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKALFGADYANVQPHSGSSANSAVYLALLSAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDENGLIDYDEVERLAVEHKPKMIVAGFSAYSRV
LDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLIL
VKANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKTYQQQVIDNARAMAAV
FVERGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGDAHITVNKNAVPNDPQSPFVTSG
IRIGTPAVTTRGFKEGECRTLAGWICDILDDLENPAVIERVRGQVADLCATFPVYAD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccaactgcagggctatgacgatgccctgctcgcggcaatccag
gccgaagaacagcgccaggaagaccatatcgagctgatcgcctcggaaaactactgcagc
cagcgcgtgatgcaggcgcaaggcagtggcttgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcatgtggacaaggtcgaggcgctggccatcgag
cgcgccaaggccctgttcggcgccgactacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggcactgctgagcgcgggcgacaccatcctcggcatgagc
ctggcgcatggcggccacctgacccacggcgccaaggtgtcgtcatcgggcaagctgtac
aacgccgtgcagtacggcatcgacgagaacggcctgatcgattacgacgaagtcgagcgc
ctggcagtcgagcacaagccgaagatgatcgtcgccggtttctcggcttactcgcgcgtg
ctggacttcccacgtttccgcgccatcgccgacaaggtcggtgccctgctgttcgtcgac
atggcccatgtcgccggcctggtcgcggccggtctgtaccccaacccggtgccgttcgcc
gatgtggtcaccaccaccacgcacaagaccctgcgcggcccgcgtggcggcctgatcctg
gtcaaggccaacgaagagatcgagaagaagctcaactccgccgttttccccggcgcccag
ggtggcccgctgatgcatgtgatcgcggccaaggcggtgtgcttcaaggaagcactggag
ccgggcttcaagacctaccagcagcaggtgatcgacaatgcccgcgccatggcggcagtg
ttcgtcgagcgcggctatgacgtggtctccggcggcaccgacaaccacctgatgctgatc
agcctggtcaagcagggcctgaccggcaaggcggctgacgcagcccttggcgatgcccac
atcacggtgaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtgacctcaggc
atccgtatcggcacgccggcggtgaccactcgcggcttcaaggaaggcgaatgccggacc
ctggccggctggatctgcgacatcctcgacgacctggaaaacccggccgtgatcgagcgc
gtgcgcggccaggtcgccgacctctgcgccaccttcccggtctacgctgactga
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