Ectopseudomonas toyotomiensis: JWV26_19700
Help
Entry
JWV26_19700 CDS
T07285
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pty
Ectopseudomonas toyotomiensis
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pty03016
]
JWV26_19700 (rnd)
Enzymes [BR:
pty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JWV26_19700 (rnd)
Transfer RNA biogenesis [BR:
pty03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JWV26_19700 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QSL91961
LinkDB
All DBs
Position
4233132..4234265
Genome browser
AA seq
377 aa
AA seq
DB search
MANDIHWILDDASLAEHCAVWQALPFVALDTEFMRVDTFYPIAGLLQVSGGDGAYLIDPL
RISDWRPFAALLEAPGVVKVLHSCSEDLEVFLRLTGSLPAPLFDTQLAAGYLNLGFSMGY
SRLVQALLDIELPKGETRSDWLQRPLSELQVRYAAEDVSHLVEVYRALMARLAPQKVEWI
LEDGAELVANLGREIAPEDAWRDAKLAWKLSRQQQAVLRALCAWREREARARNQPRNRIL
REHSLWPLARTQPDNLVALARIEDMHPKTVRQDGETLLQLIRDAAALPPEQWPEALPEPL
PVEASALLKKLRAVGQREGERLDIVPELMLRKKTLEALLKSGYPNGPYQLPDSLRGWRRE
LMGQALLDCLAAEGESA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggctaacgacattcactggattcttgacgacgccagcctggctgagcattgcgctgtc
tggcaggcgctgcccttcgtcgcgttggacaccgagttcatgcgcgtcgacaccttctat
cccatcgctgggttgctgcaggtcagcggtggcgacggcgcctatctgattgaccccttg
cgtatcagcgactggcggccgttcgccgcgctgctcgaagcgccgggcgtggtcaaggta
ctgcattcgtgcagtgaggatctggaggtcttcctgcgcctgaccggcagcttgccggcg
ccgctgttcgatacgcaattggcggctggttacctcaatctcggtttctccatgggctac
tcgcgcctggtacaggcgctgctcgatatcgagctgcccaagggcgaaacccgctccgat
tggctgcagcggccactgtccgaactccaggtgcgttacgccgccgaggacgtctcgcac
cttgtcgaggtgtaccgcgccctgatggcccgcctggcgccgcagaaggtcgagtggatt
ctggaggacggtgccgagctggtcgccaatctcggtcgtgagatcgccccggaagatgcc
tggcgcgatgccaagctggcctggaaactatcgcgccagcagcaggccgtgctccgcgcg
ctgtgcgcctggcgcgagcgcgaggcgcgcgcgcgcaaccagccacgcaatcgcatcctg
cgtgagcattcgttgtggccgctggcccgtacccagccagataacctggtggcgctggcg
cgcatcgaggacatgcacccgaaaaccgtgcgtcaggacggggagacactgctgcagctg
attcgtgatgccgcggcgctgccgcccgagcagtggcccgaagccttgcccgagccgttg
ccagtcgaagcctccgcgctgttgaagaagctacgcgccgtcggccagcgcgagggcgag
cgcctggatatcgtgcccgagctgatgctgcgcaagaaaaccctggaggccctgctgaaa
agcggctatcccaatggtccttatcaattgcccgactccctgcgtggctggcgccgggag
ctgatgggccaggcgctgcttgactgcctggccgctgaaggagaatccgcgtga
DBGET
integrated database retrieval system
