Ectopseudomonas toyotomiensis: JWV26_19920
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Entry
JWV26_19920 CDS
T07285
Name
(GenBank) retention module-containing protein
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWV26_19920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
HemolysinCabind
Big_9
DUF4114
Peptidase_M10_C
Cadherin_5
VWA_2
VWA
Bact_surface_Ig-like
GTPase_binding
Motif
Other DBs
NCBI-ProteinID:
QSL92004
UniProt:
A0ABD7DU23
LinkDB
All DBs
Position
4300037..4308949
Genome browser
AA seq
2970 aa
AA seq
DB search
MATLIGVVSQVVGEVFAVASDGSRRPISEGDRVYAGEQLVTGASGAVAVAMTNGQQLTLG
RDSSMTLDAQMLATSPDSQTPTADAPPPVPSDSDLTDVERLQAAIEAGVDPTLEGEATAA
GPGAGGGAGGVGGGHSFVLLGEVGGALDPVIGFPTEGLSTGPEFPDGEPIVDPDDAVVLE
VDGTPTGGEAINAVDEEGLPGGIAGGPNDLPGEAASVFGILGYSFGPDGPGGFTWSTAGL
SGLGMTSGGVPLSYEVSLDGLTLMAFAGDQEVFTLEITDLLAGTYTFELLAALDHEPPLP
GGSDENDLFFTFTYTITDGNGTPATGSLSILIDDDSPELAGSEGQRPVVGGVVHEDALVG
IGNAEPGNLPAQTHQLIGDPGALDALVNFGADGRGGFQLSTNPEALSDLQALALTSGKEP
LVYSVEVSDDGSISTLTATAGGVPVFTLVVTSDGGYVFTLSGPIDHPRKDGDDSELLGDK
DLALDFSKLLIATDYDGDAVPGGFNPGSFVIDVEDDVPVLVEDGVKHCLTITYQGGDASY
LNSYGYYIKGPDGEPISGQIIWGDTSGLAEGDSITLHGLDPSQVGFFIIPNGGLNGAASN
TEVTFQIVEGQWKAFIGDTEINGAGGAHVLFSDPTLNPGGKSHVDDNTAPGNQNWEDVND
GNSDNDYNDVNIQATWTAKTPPAIGGTVHEDKLTAPNVGNQEGGQTLVISTAGGAGTLAS
LVAFGADGPGSFGLVENATVTSQLNEQGLTSGEKPLVYTASESVDGDGNLLSTTLTAAAA
ADVGGYKVFTLVINADGSFTFTLQGPIDHPQADGNDSELWSNAGQIGIDFTHLLAITDGD
GDPLNIPEGVGGLFVINIEDDVPTLSLGVNTQALAQLEVALDETRGNQDRYAANDDQSQG
YTNDDNGALARVTTQLAGGLTSLFTVGGAAGADGEASLNGTLSFSGVPPQGLATTLSATV
GGAIRLFVDPANSQVIKGVDATGDTVFTIAIVTIDGQPQLQTTLFEAIRHPHNDQRFDEA
LDLLIKHQGSLQLQYQVTRVDGDGDAVTRTAKVELAGGNSSYFSFQDDGPKIGKFELEHG
VKLYVDESVGKGGSNQNEQGHVAPNDEPDHGNVLGYARVDGKDLFKLIADGGSDDLDSSR
TRFSLSLAGNAVDSGLNATAGGDILLYKESDGSILGKANGVTVFKISVNSADGSVTLVQY
KAIAHGDTGNHDELALLKDGVLKLNVTVYDKDGDSQSASLDLGKIVGFEDDGPKITKFEL
RHGTKLYVDESIDTTGSSQNEQGHVAPNDEQGHGNVLGYASIDGKDLFRLTVDAGSDGLD
ASRTRYQLNLSQDGVDSGLDATAGGDIRLYKDGDGNVLGVADGVTVFKISVNAGNGSVTL
VQYEAIVHGKTSNHDELALIRAGVLKLGVTVYDKDGDSWSSNLDLGKIVGFEDDGPSACI
TQAAHALDDEGLPNGINGGEGDVTGASTTVTGTLVFDAGSDGLRGIALSGPSVLGCEDVT
STWNAVTNTLTISSTERGTLVTVVLTDPALGKYELELHKPLMHPAGQDENDIKLQIGYTV
TDGDGDTAEGKLVVNIDDDTPTIQAMQPGFESQATFLGSDAGYQNSYGYYSRDADGNPSV
GKVIWADVKAQVAGATFDLDGLDPSEIGFFIIPNGAANAALSNGAELTFEQDVDGNWQAL
LGGVPLTGAGGANVLFDRAEFNPGGSHLQDNAEPGNQNWEDLTDAPDYDYNDVNTNVTWG
MPLQVDETYLRTPDATASRNFSSAFNAEYGADGPGSLTYELVIKSPDSGLVDTKSDEAVK
LVFNGSVLEGRTETTNELVFTLSVDAAGLVTLTQLRAVVHPTAQPDELHLLGSDKIGLQA
TITDADDDQASASIDLGQVLGFRDDAPMAVNDEIAGEVSRTAVDQVVGNINALIGNDNFG
NDGKASVSPVQIIGQGSQGGTLVIDAGGNLVYSAGSGASAGTEVFTYQITDGDGDVSTAT
VTLTLGGNDPVGGQASGSVDEDGLTNGLAEGPNDLAGEATTAGGTLGYQVDSFGGFAWDA
SGLGRLSSGGSDLNYQLSADGKTLSAFDAGGNPVFTLSLTNSDTGQYSFKLFKPLDHPAP
DVDGTADENDLNLAFSYTLWDSAAPSAPATGSLTITVDDDSPATPDDIAKSASEPQGIQT
NLMVVLDLSGSMDEAPSGVSGFSSKLALANDAVKRLIDSYDNLGDVMVRIVTFANTASAV
GEVWMTAVDAKAWLTDLASNAGNGSTNYDDALIEAMDAYDSSGKLTGAGVQNVSYFLSDG
QPTLSNANPGSNNSGSQYNPELGDGIGAGEEADWIAFLTAKDIKSYALGMGLGSDLDKTL
LNPIAYDGKAGVNTDGILVSNLNQLNDTLQGTVTGTVISGNLISEGSNGFGADGPGLQPI
AAITHNGVTYTSESAAYDEASHTLTFNTAGGGSFSVNLVTGAYTYNFNGDVAEDVTDTIR
YTLIDRDGDAVSADLKLTITDSSEVYAYDNYNQAIVGQQWVDADPTTTTLANFSSGNMNN
SQGSQWVFDNTGSVNGGSANVVSGDRSPEANQWHIAGDVNRSSSSGTLSFKDSDGGGVSS
ALTPTFSVASGSSAKITFTVTLVNEWLGNQFQDGDTFTWSLVNDVSGAVLKSGATTSSGS
TTIDDVAAGTYRIRYTLTDKTGGFWSRPAEVRVDNITLITVAAAMLVDTATAVAGNVLTD
ANNYLYSDHPWGAVDSKGSEGATLSVLDNGSFVAVSTSKTIDGQWGSLLLHSDGSYTYTP
DPDYANLGKEDVFTYQLTQPDGDVSTARLVVGIGSGAAVQPNVVMGHEALNDTLLGSEGS
DVLLGLGGNDTLHGLGGNDRLEGGDGNDTLIGGKGNDILIGGAGNDTFVWNSDDRGGNYH
DIVKDFGNGADKLDLSQLLVGVSDPASADVLTQYLSFDFVSDPGSTVINIASAGGGAPLD
QTITLENTILSGGNTADIIQGMLDQNQLVA
NT seq
8913 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttattggtgtcgtcagtcaggtcgtcggcgaagtgttcgcggtagcgagc
gacggatcgcgccggccgatcagtgaaggagaccgggtctacgcgggcgagcaactggta
accggcgcttcgggcgcggtggccgttgccatgaccaacggccaacaactgacgcttggg
cgcgacagcagcatgacgctcgacgcgcagatgcttgctaccagtcctgactcgcagact
ccgacggccgatgcgccgccccccgttcccagcgacagcgacctgaccgatgtcgagcga
ctgcaggcggcgatcgaggccggcgtcgacccgaccctcgaaggtgaagctaccgccgcc
ggaccgggtgcgggtggtggtgcgggcggcgtcggtggtggccactccttcgtgctgctc
ggcgaggtcggcggcgcactcgacccagtgataggtttccctaccgaggggctcagcacc
ggccccgaattccccgatggcgagccgattgtcgatccggatgacgcagtggtacttgag
gtcgacggcacccctaccgggggcgaggctatcaatgcagtcgatgaggagggtttgcca
ggcggcattgccggcggtccaaatgatcttcccggtgaggctgcttcggtattcggtatt
ctgggctacagctttggtcccgacggtccgggcggtttcacctggagcacggctgggctg
tccgggttgggaatgacttcggggggcgtaccgcttagctacgaggtgagtctggatggc
ctgactttgatggctttcgctggtgatcaagaggtcttcacactcgagataaccgacctg
ctggccggtacctacacatttgaactgctagccgcgttggatcacgagccgccgctgccc
ggaggcagcgatgagaacgatcttttctttaccttcacctacaccattacggacggcaac
ggcacacctgcgaccggcagcttgagcattctgatcgacgacgacagtcccgaactggcc
ggtagtgaaggtcagcgcccagtcgtcggaggcgtcgtgcatgaagatgctctggttggt
atcggcaatgccgagcccggcaacctgcctgcgcaaacccatcagctgattggcgatccg
ggggcactggatgcgctggtcaacttcggggctgacgggcgcggtggcttccagctgagt
accaaccctgaggcattgagcgatctgcaggcattggccctgacatcgggtaaggagccg
ttggtctattccgtcgaggtctcggacgacggcagcataagcaccctgacagcgacagcg
ggaggtgtgccggtattcacgctggtggtgaccagcgatggtgggtatgtcttcaccttg
tcggggccgatcgatcatccacgcaaggatggagatgacagcgagctgttgggcgacaag
gatctcgcgctggacttctccaagctgctgatcgccaccgactacgatggtgatgcggtg
ccaggcggcttcaaccctggcagctttgtgatcgacgtggaagacgatgtgcccgtgttg
gtggaagacggagtcaaacactgcctgaccatcacgtatcagggcggtgatgcgtcatac
ctcaacagctatggctattacatcaaaggccccgatggtgagccgattagcggtcagatc
atctggggcgacaccagcggcctggctgaaggagactcgatcacccttcatggcctcgac
ccgagccaggttggtttcttcatcattcccaatgggggcttgaacggcgcagccagcaac
accgaggtaaccttccagatcgtggagggacagtggaaggccttcatcggcgatacagaa
atcaatggggccggtggcgctcacgttctgttcagtgacccgacgctgaatcccggcggc
aagtcccatgttgacgacaataccgcgccgggcaaccagaactgggaggatgtcaatgac
ggcaacagcgacaacgactacaacgacgtcaatatccaggccacctggacggccaagacg
ccgccagctatcggtggcacggtgcatgaagacaaactgacggcacccaatgtcggtaat
caggagggcgggcagacgctggtcatcagcactgctggcggtgctggcacgctggcctcg
ctggtcgccttcggtgccgatggccctggcagcttcggcctagtagaaaacgccacggtc
acttcgcaactgaacgagcaggggctgacctccggcgaaaaaccactggtctacacggcc
agcgaaagcgtcgatggcgacggtaatctgctcagcaccaccctgaccgctgcggctgcc
gcggatgttggcggctacaaagtatttaccctggtgatcaatgccgatggcagcttcacc
ttcaccctgcaagggccgatcgaccacccgcaggccgatggcaacgacagtgagctgtgg
tcgaacgctggtcagatcggcatcgacttcactcacctgctggccatcaccgatggtgac
ggcgatccgctgaacatccccgaaggtgttggcggcctgttcgtgatcaatatcgaggac
gatgtgccgaccctgagtctcggggtcaatactcaggcactggctcagttggaagtggca
ctggacgaaacccgtggcaatcaggaccgttacgccgccaacgatgaccagagccagggc
tacaccaatgacgacaatggtgcgctggccagggtcactactcagctcgctggcggtttg
acctcgctgttcaccgtcggcggggcagcaggggctgatggcgaggcttcgctcaatggc
acgctgagcttctccggggtgccgccccaggggctggccacgaccttgtccgccaccgtt
ggcggtgccatccggctgttcgttgacccagccaacagtcaggttatcaagggtgtcgat
gccactggcgatacggtctttaccatcgccatcgtcaccatcgatggtcagccgcaactg
cagaccacgctgttcgaagcgatccgtcatccgcacaacgatcagcgtttcgacgaggcg
ctcgacctactgatcaaacaccagggctcattgcagctgcagtaccaggtcacccgtgtc
gacggtgatggtgacgcggtgacccgtaccgctaaggtcgagcttgctggcggtaattcg
tcctacttctcctttcaggatgatggtccgaaaatcggcaagttcgagctggagcatggc
gtcaagctctacgttgacgagtcagttggcaaaggcggctccaatcagaacgagcaaggt
catgttgcgccgaacgatgagcccgaccatggcaatgtgctggggtatgcacgagtcgat
ggcaaggatcttttcaagctgatcgccgatggcggttccgatgacctggacagcagccgt
acccggttctccctgagccttgctggcaatgctgtggactcggggctgaatgccacggcc
ggtggcgacattcttctgtacaaggagtccgatggcagcattctgggtaaggccaatggc
gttacggtgttcaagatcagcgtcaactctgctgacggcagcgtgaccctggtgcaatac
aaggccatcgcgcatggtgataccggcaaccatgacgagctggcgctgctcaaggatggc
gtgctgaaactgaacgtgaccgtctatgacaaggacggcgactcgcagagcgccagcctg
gatctgggcaagatcgtcggtttcgaagacgacggcccgaaaatcaccaagttcgagttg
cgccacggtaccaagctgtacgtcgacgaatcgatcgacaccacaggttccagccagaac
gagcagggccatgttgcgccgaacgatgagcaaggccacggcaatgtgctcggctacgcc
agcatcgacggcaaagacctgttcaggctcaccgtggatgcggggtcagatggcctggac
gcatcgcgtacccgttaccagctgaatctgagtcaggacggcgtggactctgggctggat
gccactgctggcggcgacattcgcctctacaaggacggtgacggcaacgtgctgggtgtc
gccgatggcgtgaccgtattcaagatcagcgtcaatgccggcaatggcagtgtgaccctc
gtgcaatacgaagccatcgtccacggcaagaccagcaaccatgacgaactggcactgatt
cgtgccggtgtgcttaagcttggtgtgaccgtctatgacaaggacggcgactcgtggagc
tccaacctggatctgggcaagatcgtcggcttcgaggacgacggcccctccgcttgcatc
acccaggcggcccatgcgctggacgatgaaggcctgcccaatggcatcaatggtggtgag
ggtgatgtaactggggcgagtaccacggtcaccggcacgctggtgttcgacgccggctcc
gatggtctgcgtggtatcgccttgtccgggccgagcgtgctgggctgcgaggatgtcacc
tcgacctggaacgccgtcaccaacacgctgaccatcagcagtaccgagcgcggcacgttg
gtgaccgtggtgttgaccgatccggcgctcggcaagtacgagctggagctgcataaacct
ctgatgcatccggctggccaggatgaaaacgacatcaagctgcagatcggctacaccgtg
accgacggtgatggtgataccgccgagggcaagctcgtggtcaacatcgacgacgacacc
ccgaccatccaggccatgcagccgggcttcgaatcgcaggccactttcctcggcagcgat
gccggttatcaaaacagctatggctattactcgcgagatgccgacggcaatccatccgtg
ggcaaggtgatctgggctgatgtaaaggcgcaggtggcaggcgccaccttcgatctggat
gggctcgatccgagtgagatcggcttcttcatcatccccaatggtgcagccaacgctgcg
ctgagcaatggtgccgagctgaccttcgagcaggatgtcgatggcaactggcaggccctg
ctgggcggggtaccactgactggcgctggtggtgccaacgtgctgttcgaccgtgccgag
ttcaacccgggcggctcgcatctgcaagacaacgccgaaccaggcaaccagaactgggag
gatctcaccgacgctcccgactatgactacaacgacgtcaataccaacgttacctggggt
atgccgctgcaggtggacgagacctacctgaggacgccggatgccacggccagccgcaac
ttcagttcggccttcaacgccgaatatggtgccgatggtcctggttccctgacttatgaa
ctggtgatcaaatcgccagactccgggttggtcgataccaagagcgatgaagcggtcaag
ctggtgttcaacggttcggtgctcgaaggtcgtaccgaaaccactaacgagctagtcttc
accctgagcgtcgacgctgcagggctggtgaccctgacgcaactgagggccgtggttcat
cccactgcccagccggatgaactgcatctgctgggcagtgacaagatcggactgcaggcc
accatcaccgatgccgacgacgatcaggcctcggccagtatcgacttgggccaggtgctg
ggcttccgtgatgacgcaccgatggcggtcaacgatgagattgccggtgaggtttcacgc
acggcggtcgatcaggtcgtcggcaacatcaacgctctcatcggcaacgacaactttggc
aacgatggcaaggcaagcgtctcgccagtgcagatcatcggccagggcagccagggcggt
acgctggtcatcgatgccggcggtaatctggtctacagcgccggcagtggtgccagcgcc
ggtacggaggtgttcacctatcagatcaccgacggcgatggcgacgtttccactgccacc
gtgaccctcacgctcggtggcaatgacccggtcggtggtcaggcctctggcagcgtcgac
gaggatggcttgaccaatgggctggccgaaggccccaatgatctggctggagaggccacc
acggccggtggaacgctcggttatcaggtggatagcttcggtggtttcgcctgggatgcc
agtggtctcggcagactgtcttcaggcggctcggatctcaactatcagctcagtgcagac
ggcaagacgttgagcgcgttcgatgccggtggcaatccggtcttcaccctcagcctgacc
aactcggataccgggcaatacagcttcaagctgttcaagccgctcgaccatccggcacca
gacgtcgatggaacggcagacgagaacgacctgaacctggccttctcctacacgctctgg
gactctgctgcgccttcggctccggccacaggtagcctgacgatcacggtggatgatgac
tcgccggccacgcccgacgacatcgccaagtctgccagcgagccgcaaggcatccagacc
aacctgatggtcgtgctggatctgtccggcagcatggacgaagcgccgtcgggtgtcagc
ggtttcagcagcaagctggcgctggccaatgatgccgtgaagcgtctgatcgacagctac
gacaacctcggtgacgtgatggtgcgcatcgtcacctttgccaataccgccagtgcggtg
ggcgaagtctggatgaccgccgtcgatgcgaaggcctggctcaccgacctggccagcaac
gctggtaacggctcgaccaactatgacgatgcgctgatcgaggcgatggatgcctacgat
tcatccggcaagctcaccggcgcaggggtacagaacgtttcgtacttcctttccgatggt
caaccaaccctgtccaacgccaacccgggcagcaacaacagtggtagccagtacaacccg
gaactgggcgatggcatcggtgccggcgaagaggcggactggatcgccttcctcacggcc
aaggacatcaagtcctatgccctgggtatggggctgggcagtgacctcgacaagaccttg
ctcaaccccatcgcttatgacggcaaggcgggcgtcaacaccgatggcatcctggtctcc
aacctcaaccagctcaacgacaccctgcagggtacggtgacggggacggtgatctccggc
aacctgatcagcgaaggcagcaatggtttcggtgccgatggtccgggtctccagccaatc
gccgcgatcacccacaacggtgtgacgtacaccagtgagtcggctgcctacgatgaggcg
agccatacgctgaccttcaacacggcaggtggtggctcgttcagcgtcaacctggtcacc
ggggcttacacctacaacttcaatggtgatgtcgcagaagatgtgacggataccatccgc
tacaccctgatcgaccgtgacggcgatgcggtatccgccgacctgaagctgaccattacc
gacagcagtgaggtctatgcctacgacaattacaaccaggcgatcgtcgggcagcagtgg
gtcgatgcggatccaactacgacgacactcgctaatttcagtagcggcaatatgaataac
tcacaaggcagccagtgggtctttgataacactggatcagttaatggcggcagtgccaat
gtggtgagtggcgataggtcgcctgaagctaaccaatggcacatagcgggtgacgtaaac
cgcagcagttcttccggtacgctgagctttaaagattcggatgggggcggagtcagcagc
gcgttgacgcctaccttcagtgttgcctcaggtagcagtgccaaaataacgttcaccgtt
acgttggtgaacgaatggttgggcaaccagttccaggatggcgacacttttacatggagt
ttggtcaatgatgttagcggcgcggtcttaaaatccggcgctacaacaagtagtggcagt
acgacgatagatgacgttgctgcaggtacttaccgtattcgctataccctaactgataaa
acaggtggtttttggtccaggcctgcggaggtccgggtagacaacatcaccctgatcacc
gtggctgctgccatgctggtcgacacggccacggcggtggcgggcaacgtgctgaccgat
gccaacaactacctctacagcgaccatccatggggtgcggtggatagcaagggtagcgag
ggggcgacgctcagcgtgctggataacggcagcttcgtggccgtgagcacctcgaagacc
attgacgggcagtggggcagcttgctgttgcacagcgacggctcctacacctacacaccg
gatcccgactacgccaacctgggcaaggaagatgtcttcacctaccagttgacccagcct
gatggcgacgtcagcacggcgcgtttggtggtcggtatcggctccggcgctgcagtgcag
cccaatgtggtgatggggcatgaggcgctcaacgacaccttgctgggtagcgaaggcagt
gatgtgctgctggggttgggtggcaacgatacgctccatgggctgggtggcaatgatcgt
ttggagggcggtgatggtaatgacaccttgatcggcggcaagggcaacgacatcctcatt
ggcggtgccggcaacgacaccttcgtgtggaactccgatgatcgtggcggcaactaccac
gatatcgtcaaggacttcggcaatggcgcggacaagctggatctatcgcagcttttggtg
ggtgtcagcgatccagccagtgccgacgtattgacccaatacctgagcttcgacttcgtc
agcgatccgggtagtacggtgatcaacatcgccagcgccggaggtggcgcgccgctggat
cagaccatcaccctggagaacaccatcctctccggtggcaatactgcagatatcatccag
ggcatgctggaccagaatcagctggtcgcctga
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integrated database retrieval system
