Pseudomonas toyotomiensis: JWV26_20285
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Entry
JWV26_20285 CDS
T07285
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pty
Pseudomonas toyotomiensis
Pathway
pty03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JWV26_20285 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pty03400
]
JWV26_20285 (uvrB)
DNA repair and recombination proteins [BR:
pty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWV26_20285 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JWV26_20285 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSL92073
LinkDB
All DBs
Position
4386852..4388867
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAKVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALIERKDVIVVCTVSSIYGLGSPEEYLKMVLHLDRGDKMDQRALLRRLAELQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESISAFDPLTGEVIQKLPRF
TFYPKSHYVTPRETLLEAVEQIKVELQQRLEYLRGANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPDEALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFEEWEAASPQTIFVSATPGPYEGEHAGRVVEQLVRPTGLVDPQ
IEVRPARTQVDDLLSEIRLRVAAGDRVLVTTLTKRMAEDLTDYLGDHDVKVRYLHSDIDT
VERVEIIRDLRLGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNMTGSMQRAIGETERRRAKQIAFNEANGIVPKGVQKDVKDILEGAVV
PGARSNKRKGMAKAAEESARYESELRSPSEITKRIRQLEEKMYALARDLEFEAAAQLRDE
IQKLRDRLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcagttggtgacccgcttcaaacctgccggcgatcagcctgaggcgatc
cggcagatggtcgaggggctggaggcggggctttcgcaccagaccctgctgggcgtgacc
ggctcgggcaagaccttctccatcgccaacgtgatcgccaaggtgcagcgcccgaccctg
gtcctggcgccgaacaagaccctggcggcgcagctctatggtgagttcaaggcgttcttc
ccgaacaatgcggtggagtacttcgtctcctactacgactactaccagccggaagcctat
gtgccgtcgtcggacaccttcatcgagaaggatgcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgatcgagcgcaaggacgtcatcgtggtctgcacc
gtgtcgtcgatttatggcctgggcagccccgaggagtacctgaaaatggtgctgcacctc
gaccgtggcgacaagatggatcagcgcgcgctgctgcgccgcctggccgagctgcagtac
acgcgcaacgacatggacttcgcccgtgccactttccgcgtgcgcggtgatgtgatcgat
atattcccggcggaatcggatctggaagccattcgtgtcgagttgttcgatgacgaggtg
gagagtatcagtgccttcgacccgctgaccggcgaggtgatccagaagctgccgcgcttc
accttctatcccaaaagccactacgtcacgccgcgtgaaaccttgctggaggcggttgag
cagatcaaggtcgagttgcagcagcgcctggagtacctgcgcggggcgaacaagctggtg
gaggcgcagcgcctggagcagcgcacgcgcttcgacctggagatgatcctcgagttgggc
tactgcaacggcatcgagaactactcgcgctacctgtcgggccgcccgtccggcgcgccg
ccacccactctctatgactacctgccggacgaagcgctgctggtgatcgacgagtcccat
gtctcggtgccgcaggtcggcgccatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtggaatacggcttccgcctgccttctgcgctggataaccgaccgatgcgtttcgaggag
tgggaggcggccagcccgcagaccattttcgtttccgctacacctgggccttacgagggc
gagcatgccgggcgcgtggtggagcagttggtgcgaccgaccggcctggtcgacccgcag
atcgaggtgcgtccggcgcgcactcaggtcgatgatctgctctcggagatccgtttgcgt
gtggcagcgggtgaccgcgtgttggttaccaccctgaccaagcgtatggccgaggatttg
accgactacctgggcgaccatgacgtcaaggtgcgttacctgcactcggacatcgatacc
gtcgagcgggtggagatcattcgcgacctgcgcctgggcgccttcgacgtgctggtgggg
atcaacctgctgcgtgaaggcctggatatgcccgaggtgtcgctggtggcgattctcgat
gcggacaaggaaggcttcctgcgtagcgagcgctcgctgatccagaccatcggccgtgcc
gcgcgtaacctcaacggccgagcgattctgtacgccgacaacatgaccggctcgatgcag
cgcgccattggcgagaccgagcggcgccgcgccaagcagatcgccttcaacgaggccaat
ggcatcgtgcccaagggcgtgcagaaggacgtcaaggacatcctcgaaggcgccgtggtg
ccgggggcgcgcagcaacaagcgcaagggcatggccaaggcggcggaggagagcgcgcgt
tacgagagcgaactgcgctcgccgagcgagatcaccaagcgtattcgtcagctggaagag
aagatgtacgccctggcgcgcgatctggaattcgaagccgcggcgcagttgcgcgacgag
attcagaagctgcgcgatcgcttgttgcaggtttga
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integrated database retrieval system
