KEGG   Ectopseudomonas toyotomiensis: JWV26_20645
Entry
JWV26_20645       CDS       T07285                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pty  Ectopseudomonas toyotomiensis
Pathway
pty02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JWV26_20645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pty03021]
    JWV26_20645
Transcription machinery [BR:pty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JWV26_20645
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF Rv2175c_wHTH MerR HTH_24 HTH_29 PhyR_sigma-like Sigma70_r3 HTH_IclR HTH_31 HTH_17 TnsD HTH_AsnC-type HTH_5 HTH_3 MerR_1 HTH_10 DUF3080 HTH_11 FaeA HTH_38 Fe_dep_repress Phage_terminase GerE
Other DBs
NCBI-ProteinID: QSL92132
LinkDB
Position
complement(4464157..4464681)
AA seq 174 aa
MRVSVQDFSNQQLVGVLYRDHRDWLFGWLRKSLNCAQRAEDLSQDTFVRLLGRADLHSPR
EPRALLTTIAKGLLVDQFRRHALERAYLEELALAPEAVQPSPEEQALALEQLAEIDRLLG
QLSSKARAAFLYNRLDGLGHAEIAERLGVSPSRVRQYLAQGLRQCYIALYGAPQ
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgcgcgtgtcggttcaggatttcagcaatcagcagctggtcggtgtgctttatcgcgat
caccgtgactggctgttcggctggctgcgcaaaagcctgaactgcgcgcagcgcgccgaa
gacctgagccaggacaccttcgtccgcctgctcggtcgcgccgacctgcacagtccgcgc
gagcccagagccctgctcaccaccatcgccaaggggctgttggtcgaccagtttcgccgc
catgcgctggagcgtgcctatctggaagaactcgcgctggctcctgaagccgtgcaaccc
agcccggaagaacaggccctggccctggagcaactggccgagatcgatcgcctgctcggc
cagctgtcgagcaaggcacgcgcagcgttcctctataaccgtctggatggcctcggtcat
gccgagatcgccgagcgccttggtgtgtccccgtcacgcgtgcgtcaatacctcgcccag
ggcctgcgccagtgctacatcgcgctgtacggagcgccgcaatga

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