Ectopseudomonas toyotomiensis: JWV26_20690
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Entry
JWV26_20690 CDS
T07285
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pty
Ectopseudomonas toyotomiensis
Pathway
pty01501
beta-Lactam resistance
pty02020
Two-component system
Module
pty_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWV26_20690
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWV26_20690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pty02000
]
JWV26_20690
01504 Antimicrobial resistance genes [BR:
pty01504
]
JWV26_20690
Transporters [BR:
pty02000
]
Other transporters
Pores ion channels [TC:
1
]
JWV26_20690
Antimicrobial resistance genes [BR:
pty01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
JWV26_20690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QSL92140
LinkDB
All DBs
Position
complement(4474092..4475396)
Genome browser
AA seq
434 aa
AA seq
DB search
MFVLRLLNLASLRSAPTSWLLGAILVGSGGQAIANVTDENGRWDLLLRNYFLNNDLRDNS
GTGGPSYQQEWAQGFIGNLRSGFTEGSVGLGIDVHGFVGIKLDGGRGRAGTGLLPVDSRG
RSHGYASAGGALKLRAGNHLLRYGEMTVETPVFDTGDKRLQPEYATGVMLDSTLSPSLLL
QAGRFTRFKNQNGSSSHDDFSGVGASTQGAAMTLAGVRLLDSQDISAALYAAQLEDTWRQ
GYLNLKVQRGHWTLDTNLYRTHDQGAARAGAIDTLAYSLLTRYQLGAQKFTVAYQRVNGD
TPFDFVGGDSIYLANSVKYADFNGAQERSWQARYDLDFAAFGITGLNLMARYIRGHGIDS
SRAPADGAYASNRTASGGRHWERDIDLRYTVQHGSAKGLRMSLAHVSHRGNNSQNLPDID
RLYITLEYPLQGLF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcttcgccttctgaacctggccagcctgcggtcagctcccacgagctggctg
ctgggagcaatcctggtgggcagcggcggtcaggccattgcaaacgtcaccgacgagaac
ggtagatgggacttgctgctgcgcaactacttcctgaacaacgacctgcgcgataactct
ggcactggagggccaagctatcagcaggaatgggcacaaggcttcatcggcaacctccgt
tctggcttcacggaaggttcggtcgggctgggcatcgatgtgcatggcttcgtcggcatc
aagctcgacggtggccgcggccgtgccggcaccggcttgttgccggtcgactcccggggg
cgcagccatggctacgcctccgccggcggtgccctcaaactacgcgctggcaaccacctg
ctgcgctatggcgaaatgacggtcgagacaccggtattcgataccggcgacaagcgcctg
caaccggaatacgccactggagtgatgctcgacagcacgctgtcacccagcctgttgctc
caggcagggcgtttcacacgattcaagaaccagaacggcagctcttcccatgacgacttc
agcggcgtaggtgcctcgactcagggggccgccatgacgcttgccggtgttcgcctgctc
gatagccaggacatcagcgccgcactctatgcagcgcagttggaggacacctggcgccag
ggatatctgaatctgaaagtccagcgcggtcactggaccttggacaccaatctgtaccgt
acccacgaccagggtgcggcccgtgcaggcgccattgataccctggcctacagcctgctg
acgcgctatcaacttggcgcgcagaagttcaccgtcgcctatcagcgagtcaatggcgac
acgccctttgactttgtcggtggtgactcgatctacctggcgaactcggtcaagtacgcc
gacttcaatggcgcccaggaacgctcctggcaggcccgttacgatctggacttcgctgca
ttcggcattaccgggctgaacctaatggcacgctacatccgcgggcacggcatcgacagt
tcacgcgctcctgccgatggtgcctacgcatcgaacagaacagcttcaggtggccgccac
tgggaacgtgacatcgatctgcgttacacggtacagcacggctcggctaaaggcctgcga
atgagcctggcccatgtcagccaccgcggcaacaactcccagaatttgcccgacatcgac
cggctctacatcaccctcgaatacccattacaaggcctgttctga
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