Pseudomonas tensinigenes: HU718_000335
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Entry
HU718_000335 CDS
T07620
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz02025
Biofilm formation - Pseudomonas aeruginosa
ptz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU718_000335 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU718_000335 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptz02044
]
HU718_000335 (tssM)
Secretion system [BR:
ptz02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU718_000335 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
SRC-1
Motif
Other DBs
NCBI-ProteinID:
QXI06173
LinkDB
All DBs
Position
complement(66385..69924)
Genome browser
AA seq
1179 aa
AA seq
DB search
MKKFFKKVGAFLRQTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWESATARLLTIAVLFL
IWGLTMVFVSWRSGIRKKAEEESEDGQDRIRREELIDEEQKELKARFKDALKTLKTSSLY
RGRSERWRSDLPWYLLIGPQASGKTSLLDFSGLEFPINKIDRKLTRDTLGTRHCDWYFAD
HGVLIDTAGRYTTQPDVEVDGGAWTTLLELLRKRRRGRPLNGVLVTIPVETLLGGSEQDI
DTLARQIRGRLQDVHQKLHVDVPVYLVLSKADKLLGFDEFFDQLTREESDQVLGTSFRKD
QVGTDVAVLRNEFEELLRRLNSQVIMRMHSERDTQRRGRILDFPHQLGQIGERLCLFVDM
AFTGNRYQRATQLRGFYLTSAPHLTQEMDSTTAGIGASLGLNAGVLPTLRSGRSRFIHHL
FSQVIFPESDLAGLDKRERSRIHWGQRALYVGALAALALFGMLWAGGFSANYERLENLRN
LAQNWTQQRTALSPRDDAMGVLKTLDSSYAATQVFPKKGDVSYHERGGLYQGEDVNPVVK
EAYERELEKQLLPRVATMLEGQIRANMKDRDRLLNSLRAYLMLNMKDRRDAAWLKDWVAT
DWSTRYTGNTAVQNGLSTHLERLLKQPFIYPLNDQLVTQARQVLRSESLATVVYRMLREQ
ARNLPDYRFSQHLGPQGSLFIGTEYVIPGFYTQTGYQQYFSVQGSALVTDILRDNWVLGE
GAGISDMDLRRLMVELEQLYFRDYANYWSEAVGQVALPPISDAGEGAEQLAGLTSANSPV
LALLTEVRENTRFQAAADPVEEAGDAADALAGQKGKLGKVGKLAAAAADKASALNVAKTL
PDTAKKSLQRRFEPLHRLLDDNNGPAADLTPALSALNDLQLQLAGLARSSTPEQAAFEMA
KTRMSGQRDALTNLRNASGRLPRPLSVWFNVLAEDSWRLVLNDAYQYLNGRYQNELYSVY
GKTISKRYPFSASSTSDVAISDFREFFRAQGTVDRFFDSYLRPFVSGDPGNYRMRSVDGH
SLPVSKMYLDQMAAALTIRQSFFSINPAEPTVQFKLEPYTLDPAVSRSEFKFGDKTMEYR
HGPILPMSFKWPTDAEDGRTSLVMDKMAGRPIGIEKNSGPWSLFRLFDLMQTEYLTGRDV
LVLKADVGGLRANYLLTSQRTPNPFDMGVLRTFRMPVQL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttttcaagaaagtcggcgccttcctgcgccagacctgggtctggaccttg
ctgctggtgctgttcgtggcgctgctggtgtggttcgtcggcccgttgttggcggtggat
gattacaagttctgggagagcgcaaccgcgcgcttgctgaccatcgctgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcagcggtatccgcaagaaagccgag
gaagaaagcgaggacggccaggaccgcattcgccgcgaagagctgatcgacgaagaacag
aaagagttgaaggcgcgcttcaaagacgcgctgaaaaccctgaagacgtcgagcctgtat
cgcggccgcagcgagcgctggcgcagtgacttgccgtggtacctgctgatcggtccgcag
gcttccggcaagaccagcctgctggatttttccggtctggaatttccgatcaacaagatc
gaccgcaagctgacccgcgacaccctcggcacgcgtcattgcgactggtacttcgccgac
cacggtgtgttgatcgacaccgccgggcgttacaccacgcaaccggatgtggaagtcgac
ggcggtgcctggacgacgttgctggagctactgcgcaagcgtcgtcgcgggcgtcctttg
aacggcgtgctggtgaccattccggtggaaaccctgctcggtggcagtgagcaggacatc
gacaccctcgcgcgccagattcgcggccgtctgcaagacgtgcatcagaaactgcacgtc
gacgtgccggtctatctggtcctgagcaaggctgacaagctgctcggcttcgacgagttc
ttcgatcaactgacccgcgaagaaagcgatcaggtgctcggcaccagtttccgcaaggat
caggtcggcaccgacgtcgctgtgctgcgcaacgagttcgaagaactgcttcgtcgcctc
aacagccaagtgatcatgcgcatgcactccgagcgcgatactcagcgccgtggccgcatc
ctcgacttcccgcatcaactcgggcagatcggcgagcgtctgtgcctgttcgtcgacatg
gcgttcactggcaaccgttatcagcgtgccacgcagctgcgtggtttctacctgactagc
gcaccgcacctgactcaagagatggactcgaccaccgccggcatcggtgccagcctcggc
ttgaatgccggtgtgctgccgaccctgcgcagcggtcgttcgcggttcatccaccacttg
ttcagccaggtgattttccctgagtccgatctggccggtctggacaagcgcgaacgcagc
cgtattcattggggccagcgtgcgttgtacgtcggcgcactggcggcactggcactgttc
ggcatgctctgggcgggcgggttctcggccaactacgagcgtctggaaaacctgcgcaat
ctggcgcagaactggacgcagcagcgcacggcattgtcgccgcgtgatgacgccatgggc
gtgctgaaaaccctcgacagcagctacgccgcgacccaggtgttcccgaagaagggcgac
gtttcgtatcacgaacgtggtggtctgtatcagggtgaagacgtcaatccagtggtcaaa
gaggcttacgagcgcgagcttgaaaagcagctgctgccacgggttgcgaccatgctcgaa
gggcagatccgcgccaacatgaaggaccgcgaccgtctgctcaacagcctgcgcgcgtac
ctgatgttgaacatgaaagaccgtcgcgatgccgcgtggctcaaggactgggtcgccact
gactggtcgacgcgctacaccggcaacaccgccgtacagaacggtctgagcacgcatctg
gagcgtctgctgaagcagccgtttatctacccgctgaacgaccaattggtcactcaggcg
cgtcaggtcttgcgcagcgaatcgctggcgacggtggtttaccgcatgctccgcgagcag
gcgcgcaatctgccggactatcgcttcagccaacacctcggtccacaaggctcgctgttt
atcggcaccgaatacgtgatcccgggtttctacacgcaaaccggttatcagcagtatttc
tcggtacagggttcggcgctggtcaccgacatcctgcgtgacaactgggtactcggcgaa
ggcgcgggcatcagcgacatggacttgcgtcgcctgatggtcgagctggagcaactgtac
ttccgcgactacgccaactactggagcgaagcggttggccaggtagccctgccgccgatc
agcgacgccggtgaaggcgccgaacaactggcgggcctgacctcggcgaattcgccggtg
ctggcattgctcaccgaagtgcgtgagaacacccgcttccaagccgctgcagatcctgtc
gaagaagctggcgacgctgctgatgcgctggccgggcagaaaggcaaactgggtaaggtt
ggcaaacttgccgccgccgcagcggacaaggcttcggccctgaacgtggcgaagaccctg
ccggacaccgcgaagaagtcgctgcaacgccgcttcgaaccgctgcatcgtttgctcgat
gacaacaacggcccagcggcggacctgactccggcactgagcgcgctcaacgacctgcaa
ctgcaactggccggtctggcccgttccagcacgccggaacaagccgcgttcgaaatggca
aaaacccgcatgagcggccagcgtgatgcgctgaccaacctgcgcaatgcctccggtcgt
ttgccgcgtccgctcagcgtgtggttcaacgtgctggccgaagactcgtggcgtctggtg
cttaacgatgcttaccaatacctgaacggccgttatcagaacgagctgtacagcgtgtat
ggcaaaaccatcagcaagcgttatccgttcagcgccagcagcaccagcgacgtagcgatc
agcgatttccgtgagttcttccgggctcaaggtaccgtcgaccgcttcttcgacagctac
ttgcgtccgtttgtcagcggcgatccgggcaactaccgcatgcgcagcgtcgacggtcat
agcctgccggtatcgaagatgtatctcgaccagatggcggcggcactgacgattcgtcag
agcttcttctcgatcaacccggccgagccgaccgtgcagttcaaactggagccgtacacc
ctcgatccggcggtcagccgttccgagttcaagttcggcgacaagaccatggaataccgc
cacggtccgatcctgccaatgtcgttcaaatggccgaccgatgctgaagacggtcgcacc
agtctggtcatggacaaaatggccgggcgcccgatcggcatcgagaagaactccggccca
tggtcgctgttccgtctgttcgacctgatgcagaccgagtacctgaccggtcgcgacgtg
ctggtgctgaaagccgatgtaggtggcctgcgcgccaactacctgctgaccagccagcgc
acgccgaacccgttcgacatgggcgtactgcgcaccttccgtatgccggtgcagctctga
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