Pseudomonas tensinigenes: HU718_000370
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Entry
HU718_000370 CDS
T07620
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz02025
Biofilm formation - Pseudomonas aeruginosa
ptz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU718_000370 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU718_000370 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptz02044
]
HU718_000370 (tssH)
Secretion system [BR:
ptz02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU718_000370 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
NACHT
Clp_N
AAA_7
TniB
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_24
AAA_25
Hpr_kinase_C
CorA
SLFN-g3_helicase
Prominin
Motif
Other DBs
NCBI-ProteinID:
QXI06180
LinkDB
All DBs
Position
complement(75639..78296)
Genome browser
AA seq
885 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLMLGLLERPNGLLSRALQDA
DVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQTQVEDAALILALLR
NPMRYAGSRYQPLLAKLNIDRLKEFALSQQEQPAANGKPAAQGESLLQRFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLA
QVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLER
LRGELAEGGRQRQALRRDAEAGLLIDHEALDALEARLDEAEDEMVALETLWTEQKQLAER
LLELRQQLAKAREAAAVEPVVTVEEDAEGTVIETVAAEVEEGQSVEALEAQLNETHSALT
AAQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVH
ALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQ
EKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISDLCENGARPTAEVLEETIRPVLSKHFKPALLA
RMKVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLDFSWCQNLVDHLSERCTQSDSGARL
IDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGEASVTCEFA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcatccaggcgctggacgccgaaacccgtcgtgat
cttgagcgttcggccgagcgttgcgtggcccgtggcggcagcaagatcctcgtcgaagat
ttgatgctcggcctgctcgagcgaccgaacggtttgctgtcgcgcgcactgcaggatgca
gacgtcgacgccggtgaactgagcgccgcgctgcaatcgcgcgtcgaacacagcgcttcg
cgtaacccggtgttcgccccggagctggtgcagtggctgcaagatgcgctgctggtggcc
aacctcgaactgggccagacccaggttgaagatgcggcgctgatcctcgctttgctgcgc
aacccgatgcgttatgccggcagccgttatcagccgctgctcgccaagctgaatatcgat
cgcctgaaagaatttgccctgtcgcaacaggaacaaccggcggccaacggtaaacctgcc
gcgcagggcgaatcgctgttgcagcgcttcactcacaacctgactcaacaggcccgcgac
ggcaaactcgacccggtgctgtgccgtgatggcgcgatccggcagatggtcgacatcctc
gcccgtcgtcgcaagaacaacccgatcgtcgtcggtgaggccggtgtcggcaagaccgcc
atcgtcgaaggcctggcttcgcgcattgctgccggtgaagtaccgcaagtgctcaaaggc
gttgaactgctgtcgctggacatgggccttttgcaggccggcgccagcgtcaaaggtgaa
ttcgaacgtcgtctcaaaggcgtgatcgacgaagtgaaagcctcgccgaaaccgatcatt
ctgttcatcgacgaagcccacaccctgatcggcgcgggcggcaacgcgggcggttccgac
gcggccaacctgctgaagccggcactggcccgtggcgaactgcgtaccatcgctgcaacc
acctgggctgagtacaagaaatacttcgagaaagacccggcgctggcccgtcgtttccag
ccagtacaactgcacgaaccgaccgtcagcgaagcggtgaccatcctccgtggtctggcc
caggtttacgagaagagccacggcatctatctgcgtgatgacgcggtggtctcggcggcg
gaattgtccgcacgttatctggccggtcgacaactgccggacaaagccgtcgacgttctt
gacaccgcttgcgcccgcgtacgcatcagcctcgccgccgccccggaaagccttgagcgt
ctacgtggcgaactggccgaaggtggccgtcagcgtcaggccctgcgccgcgatgccgaa
gccggtctgctgatcgaccacgaagcgctggatgcgctggaagcgcgtctggacgaagcc
gaagacgaaatggtcgcgttggaaaccctgtggactgaacagaaacaactggccgagcgc
ctgctggaactgcgtcagcaactggccaaggcccgcgaagctgctgcggtcgagccagtg
gtgaccgttgaagaagacgccgaaggcaccgtgatcgaaaccgtcgctgccgaagtcgaa
gaaggccagagcgtcgaagcgctggaagcccagctcaacgaaacccacagtgcactgact
gccgcccaagtcaaagaacgtctggtcagcttcgaagtgtgcccgcgtctggtcgccgaa
gtgatcagcgcctggaccggcgtgccgttggcgcaactggcccgcgagcacaacgccaaa
gtcgccagtttcgccaccgacctgcgcacgcgcattcgtggtcaggaacaagccgtgcac
gcactggatcgctcgatgcgcgccaccgctgccggcctgaacaaaccggacgcaccggtc
ggtgtgttcctgctggtcggcccgagcggcgtcggtaaaaccgaaaccgcactggccctc
gctgacttgctgtacggcggtgatcgtttcatcaccaccatcaacatgtccgaattccag
gagaagcacaccgtttcccgcctgatcggcgcgccaccgggttacgtcggttacggcgag
ggcggcatgctcaccgaagccgtgcggcagaaaccgtactcggtggtattgctcgatgaa
gtcgaaaaggctgacccggacgtgctcaacctgttctaccaaatcttcgacaaaggcgtg
gccaacgatggcgaaggtcgcgagatcgacttccgcaacacgttgatcctgatgacctcg
aacctcggcagcgacaagatcagcgacctttgcgagaacggcgcacgcccgaccgccgaa
gtcctcgaagaaaccattcgcccggtgctgagcaaacacttcaaaccggcgctgctggcg
cggatgaaagtcgtgccgtactacccggtcggcggcccggtgttgcgcgagctgatcgag
atcaaactcggtcgtctcggcgagcgcctgaatcgtcgtcagctggatttcagctggtgc
cagaacctcgtcgatcacctgtccgagcgttgcacgcaaagcgacagcggcgcgcgcctg
atcgaccatctgctcgaccagcacgttttgccgctggttgcggatcgtctgctcgacgcc
atggccaccggtgaaagcctcaagcgtgtgcatgccacgctcgacggtgaagccagcgtg
acgtgcgagttcgcctga
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