Pseudomonas tensinigenes: HU718_001870
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Entry
HU718_001870 CDS
T07620
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ptz
Pseudomonas tensinigenes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_11
TPR_16
TPR_17
TPR_7
TPR_2
TPR_1
TPR_12
TPR_20
TPR_15
TPR_6
TPR_9
TPR_8
Motif
Other DBs
NCBI-ProteinID:
QXI06465
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Position
427981..430461
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AA seq
826 aa
AA seq
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MPRIDVPVLHRGLRPLFRVALCSQLLWPALAFADTPYDQMVRDARAGQTTPALTVLRQVP
PGQSTTGQISDHLQIASWAGLDAEVVQVYETQGRDRVLPVQALTATARAYRNLKRWDQAT
QVYNKALALEPDNADLQLGLALTQADAGKPDEAVTRAKVLVAAKPDDPSRRLALGYALTR
AGKQYDALFEYDQAFKRAGSKPEVAREYVVALQKARLPEPALRLANQRPGLIDPVTLRRL
EGDLAAERVRLAELATRSEKERYVIADRALADYDKLLATWTPDATAHDDVIRWRIDCMGA
LKARARTADVITEYQKLQAEGVKIPTYALRWVAASYLDQRQPEIATDLYRQVLAAPDADV
GDRLVDTTALYYSLLESDRADEARQVAEDAAKSQRPRVELKGLPIGNPNDEWMDAQQLAA
QAGTYGSDLPHGEERLQTLVDQAPGNVGLRLAQADLYLARQWPRRAENQLKETESMVPRD
MGLEVAQARTAMTLQEWRQMDALTDDVVARYPDNRQVQRLAREREVHDMSELRVEAYGGK
ANGGGSGDAGAVSGSRDFGIQTTLYSPPIDEDWRVFAGAGYATGDFAEGTGHHRFQRVGL
ERRTRDMTLEAEVSNHDYGFGDKQGARLAIARDINDHWQYGGSLEYLSAETPLRALNSDI
KANGGSGFIRWRANESREWRLSVSPSHFSDGNNRVEALLTGREGVYSAPNVQVDAGLEVG
TSHNSKSDDVPYFNPKSDFSVMPLVNVNHVLYHRYETSWSQQFQAGAGTYSQRDHGTGGM
ALLGYGQRYAWNDVFEVGALFSVINRPYDGDRETDLRLLVDLTFRF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggattgatgttcccgtattacatcgtggtttacgccctttgtttcgagtcgcg
ctgtgcagccaattgctctggccggcactggcgtttgccgacacaccctacgatcagatg
gtgcgcgacgcccgtgccgggcaaaccacgcccgcactgacggtcttgcgtcaggtgccg
cccggccagtcgaccaccgggcagatcagcgatcacctgcagatcgccagttgggccgga
ctcgacgccgaagtggtgcaggtctatgaaacccagggacgcgaccgcgtcctgccggtt
caggcgctgaccgccactgcgcgcgcctaccgcaacctcaaacgctgggatcaagccact
caggtctacaacaaggccctggcgctggagccggataacgccgacctgcaactgggcctg
gccctgactcaggctgacgccggcaaacccgacgaagcggtgacccgcgccaaagtactg
gtggcggccaagcctgatgatccttcccgtcgtctggcgctgggctacgcgttgacccgc
gccggcaaacagtacgacgccctgttcgaatacgatcaagccttcaaacgcgccggcagc
aaaccggaagttgcccgcgaatatgtggtcgctctgcaaaaggcgcgtctgccggaaccg
gcgttgcgtctggccaatcagcgtccgggtctgattgatccggtcaccctgcgtcgcctc
gaaggcgatctggctgccgagcgcgtgcgtctcgccgaactcgccacccgcagtgaaaaa
gaacgctacgtcatcgccgatcgcgcgctggccgattacgacaaactgctcgccacttgg
acgccggacgcgaccgctcacgacgacgtgattcgctggcgcatcgactgtatgggggcg
ctcaaggcccgggcgcgcactgccgacgtcattactgaatatcagaagctgcaagccgag
ggcgtgaagattccgacctacgccctgcgctgggtagcggcgtcgtatctggatcaacgt
cagccggaaatcgccaccgacctgtatcgccaagtgctggcggcgccggacgccgatgtc
ggtgatcgactcgtagacaccactgcgctgtactactcgctgctggaaagcgaccgcgct
gatgaggcgcgccaagtcgctgaggacgccgccaagtcccagcgtccgcgtgtcgaactc
aaagggctgcctatcggcaaccccaacgatgaatggatggacgcccagcaattggccgct
caggccggcacttacggttccgacttgcctcacggtgaggagcgtttgcagaccttggtc
gatcaagcgccgggtaacgtcggtttacgtctggctcaggccgatctgtacctggcccgc
caatggccgcgtcgcgcggaaaaccagctcaaggaaaccgagagcatggtgccgcgcgac
atgggcctggaagtcgcgcaggcgcgcaccgccatgacgctgcaggaatggcggcagatg
gatgcgctgaccgacgacgtcgtcgcgcgttacccggacaaccgccaagtgcagcgtctg
gcccgcgaacgcgaagtgcatgacatgtctgaactgcgcgtcgaagcctacggcggcaag
gccaacggtggcggcagtggcgatgccggagccgtcagcggcagccgcgatttcggcatc
cagaccaccctgtacagcccgccgatcgatgaagactggcgcgtgttcgccggggccggg
tatgccaccggcgacttcgccgaaggcaccgggcaccaccgcttccagcgcgttggcctg
gagcggcgcacccgcgatatgaccctcgaagctgaagtgtccaaccacgattacggtttc
ggcgacaaacaaggcgcgcgtctggcgatcgctcgcgacatcaatgaccactggcagtac
ggcggcagcctcgaatacctctcggccgagacaccattgcgcgcgctcaacagtgacatc
aaggccaacggcggcagcggtttcatccgctggcgcgccaacgaaagccgtgagtggcgc
ctgtcggtaagcccgtcgcacttcagcgacggtaacaaccgcgtcgaggctttgctcacc
ggccgcgagggcgtctacagtgcgccgaacgtgcaggtcgacgccggtctggaggtcggc
accagccacaactccaagtccgatgacgtgccgtacttcaacccgaaatccgacttcagc
gtgatgccgctggtcaacgtcaatcacgtgctctaccaccgctacgaaacttcgtggagc
cagcagttccaggccggcgcgggtacgtacagccagcgtgatcacggcaccggtggcatg
gccctgctcggttacggccagcgttatgcctggaacgacgtgttcgaggtgggcgctctg
ttcagtgtgatcaaccggccttacgacggtgatcgggagaccgatctgcgtctgctcgtc
gacctcactttccgcttctag
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