KEGG   Pseudomonas tensinigenes: HU718_002460
Entry
HU718_002460      CDS       T07620                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ptz  Pseudomonas tensinigenes
Pathway
ptz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ptz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU718_002460
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ptz02022]
    HU718_002460
Two-component system [BR:ptz02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HU718_002460
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 HTH_50 FleQ HTH_8 AAA uS17m_C DUF6716 HTH_10
Other DBs
NCBI-ProteinID: QXI06575
UniProt: A0ABX8PYT4
LinkDB
Position
complement(560557..561939)
AA seq 460 aa
MTIDNRIQVVLIDDDPHLRQALGQTLDLAGLKILPLSEAKGLAAQLERDWPGVVVSDIRM
PGMDGLELLSELHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR
ALALRRLVLDNRSLRLALSDRNELSARLVGHSTPMLRLREQIGALAATKADVLILGETGA
GKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSMDVQVKLLRMLQERVVERLGGNQLIPLDIRVIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDALVLFQHYADEASARHGLPPHELQPAQRALLLRHT
WPGNVRELQNAAERFALGLELALDNSGAEGAGATVEVTGGGLSEQVENFEKSLIAAELGR
SHSSVRSLAEALGIPRKTLHDKLRKHGLNFGDSSHGDENE
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaccatcgacaatcgcattcaggtggtgttgatcgacgacgatccgcacctgcgtcag
gccctcggccagaccctggatctggccggcctgaaaatcttgccgctgtccgaggccaag
ggcctggccgcacagctggagcgtgactggccgggtgtggtggtcagcgatatccgcatg
ccggggatggacggtctcgaattgctcagcgaactgcacgcgcaggatcccgaactgccg
gtgctgctgatcaccggccacggcgacgtaccgctggcggtgcaggctatgcgcgccggc
gcttatgactttctcgaaaaacctttcgccagcgacgcactgctcgacagcgtgcgccgc
gccctcgccttgcgccgactggtgctggacaaccgcagcctgcgcctggccctcagcgat
cgcaacgaattgagtgcacgtctggtcggccactccacgcccatgctgcgtctgcgtgag
cagatcggcgcgctggccgcgaccaaagctgatgtgctgatcctcggcgaaaccggcgcc
ggtaaagaagtggtcgcccgtgcgctgcacgatttgtccagccgccgtaacggcccgttc
gtggcgatcaacgccggcgcactggccgagtcggtggtggaaagcgaactgttcggccac
gaacccggcgcgttcaccggtgcgcaaaaacgccggatcggcaagttcgaattcgccaat
ggcggcacgctgtttctcgatgaaatcgaaagcatgagcatggacgtgcaggtgaagtta
ctgcgcatgttgcaggagcgcgtcgtcgagcgcttgggcggcaatcaactgatcccgctg
gacatccgcgtcatcgccgcgaccaaggaagacctgcgtcaggccgccgatcaaggacgc
ttccgcgccgacttgtattaccgcctcaacgtcgcgccactgcgcatcccgccgctgcgc
gaacgcggcgaagatgcgctggtgctgttccagcattacgccgatgaagccagcgcccgc
cacggcctgccgccccacgaactgcaaccggcacagcgcgccttgctgctgcgccacacc
tggccgggcaacgtgcgcgaactgcagaatgccgccgaacgctttgctcttggactggaa
ctggcgctggataacagcggcgccgaaggtgccggcgccaccgtggaagtcactggcggc
gggctcagcgagcaggtggaaaatttcgaaaaatccttgatcgctgccgaactggggcgc
tcccacagttcagtgcgcagcctcgccgaagccttgggcattccgcgcaaaaccctgcat
gacaaattgcgcaagcatggcctcaacttcggcgacagtagccatggggacgagaacgaa
tga

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