Pseudomonas tensinigenes: HU718_002470
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Entry
HU718_002470 CDS
T07620
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz00521
Streptomycin biosynthesis
ptz00523
Polyketide sugar unit biosynthesis
ptz00541
Biosynthesis of various nucleotide sugars
ptz01100
Metabolic pathways
ptz01110
Biosynthesis of secondary metabolites
ptz01250
Biosynthesis of nucleotide sugars
Module
ptz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU718_002470 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU718_002470 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU718_002470 (rfbC)
Enzymes [BR:
ptz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HU718_002470 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QXI06577
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All DBs
Position
complement(563786..564331)
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AA seq
181 aa
AA seq
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MNVITTDLPGVLIIEPKVFGDERGFFYESFNAKAFQNATGLDTQFVQDNHSRSQKGVLRG
LHYQLQNTQGKLVRVTVGEVLDVAVDIRRSSPHFGKWVAVRLSADNHRQLWVPEGFAHGF
VVLSEFAEFLYKTTDYYTPSAERSIRWDDPDLAIDWQLDEAPKLSAKDQAAAFFKDADVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatcaccaccgacctgcccggtgtcctgatcatcgaacccaaggtgtttggt
gacgaacgcgggtttttctacgaaagtttcaatgccaaggctttccagaacgcaacgggg
ctggacacgcaattcgttcaggacaaccactcgcgctcgcaaaaaggcgtattgcgtggt
ctgcattaccaactgcaaaacacccagggcaaactggtccgcgtaactgtcggtgaagta
ttggatgtcgccgtggacattcgccgcagctcaccgcacttcggtaaatgggtggccgtg
cgcctgtcggcagacaaccaccgtcagttgtgggtcccggaaggtttcgcccacggcttc
gtcgtgctgagcgagttcgccgaattcctctacaagaccaccgattactacactccgtcg
gcagaacgcagcattcgctgggacgatccggatctggccatcgattggcaactggacgaa
gccccgaagctgtccgccaaggatcaggctgcagccttcttcaaggacgctgacgtcttc
gcctga
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