Pseudomonas tensinigenes: HU718_004515
Help
Entry
HU718_004515 CDS
T07620
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU718_004515 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptz03400
]
HU718_004515 (recD)
Enzymes [BR:
ptz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU718_004515 (recD)
DNA repair and recombination proteins [BR:
ptz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU718_004515 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
AAA_22
Viral_helicase1
AAA_16
UvrD-helicase
SLFN-g3_helicase
AAA_17
AAA_25
T2SSE
AAA_28
AAA_5
ADK
NTPase_1
SAS4
nSTAND3
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QXI06966
UniProt:
A0ABX8Q0L6
LinkDB
All DBs
Position
1055438..1057546
Genome browser
AA seq
702 aa
AA seq
DB search
MSRTFADLLPTPLAADSLSRLSPLTSADDLLILLTRWVERGWLRALDKAFVGFLHELERN
TDPLVLLAAALTSHQLGHGHVCLDLYETLKAPDFALSLPPEGDVQGGVLLLPSQLLEALD
GAHWCKVLAGSSLIALAADSSDSAQQRPLVLAGKRLYLRRYWAYERRIDTALRQRLQQVE
PTPDDLPQRLNELFGSAKTGEVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALL
QAPAVATGHPLRIRLAAPTGKAAARLTESISQQVQSLEVSEAVRAKIPCDVTTVHRLLGS
RPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEA
GAVLGDLCRDAESGWYNPQTRRWLESVSGESLQDSGLHEDVDGTHPLAQQVVMLRHSRRF
GEGSGIGQLARRVNQQLPDEARQLLTAGHYDDVYSLPLKGEHDHTLERLLLEGHGDGPQG
YRHYLSVLRDQRPPSGRPLEHPDWVIWAREVLQAFDTFQLLCAVRKGPWGVEGLNQRITA
ALLKARLIENDQQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPEREGPDAGKPVLRVAFP
RNDGQGGVRFVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPDALNPVLNKELIYTGIT
RAKHWFTLIESRSGVFEEAVQRRVKRLSGLMLELEEGAAPRG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcacctttgccgatctgctccctacgccgctggctgctgacagtctgtcgagg
ttatcgcccctgaccagcgccgacgacctgttgatattgctgacccggtgggtcgagcgc
ggctggttgcgtgcgctggacaaagcgtttgtcgggttcctgcacgaacttgaacgcaac
acggatccgctggtgttgcttgctgctgccctgaccagtcatcaacttggccacggtcat
gtctgtctcgatctgtatgaaaccctgaaagcgcccgacttcgctctttcgctgcccccc
gaaggggacgtgcaaggtggtgtcttgttgctaccttcgcaattgctcgaggcgctcgat
ggtgctcactggtgcaaggttctagcgggcagctctctgatcgcgctggcggcggatagc
agcgattcagcacaacaacgcccgttggtgttggcgggcaaacgcctgtatctgcgacgc
tactgggcctacgagcggcgcatcgatacggcattgcgtcagcgtctgcagcaagtcgag
ccgacgccggacgatctgccgcagcgcttgaacgagctgttcggatcagcgaaaacgggt
gaggtgatcgactggcagaaactcgcctgcgccctcgcaactcgtggcgctttcagcatc
gtcaccggcggtccgggcaccggcaaaaccaccaccgtggtgcgtttgctggccctgctt
caagcgcctgcggttgccaccggtcatccgctgcgaattcgtctggcggcaccgacgggc
aaggccgcggcgcggctgaccgagtccatcagccagcaagtgcagtcgttggaagtcagc
gaagcggtgcgggcgaaaatcccttgcgacgtcaccaccgtgcatcgcctgctgggcagc
cgtcccggcacccgacacttccgtcaccacgccggcaatcgcttgccgctggatgtgctg
gtggtcgacgaagcctcgatgatcgacctggaaatgatggccaacctgctggatgccttg
ccaccccatgcacgactggtcttgctgggcgacaaggatcaactggcctccgtggaagcc
ggcgcggtgctgggggatttgtgtcgagacgccgagagtggctggtacaacccgcagacc
cgacggtggctggagtcggtcagcggtgagtcgctgcaggacagtggcttgcatgaagac
gtcgatggcacccacccgctggcccagcaagtggtgatgctgcgccactcccggcgcttc
ggcgagggcagtgggattggtcagctcgcgcgtcgggtcaaccaacagttgccggatgaa
gcgcgccagttgctcacggccgggcactatgacgatgtgtattcgctgccgctcaagggc
gagcacgatcacacgctggagcgactgttgctggaggggcatggcgacggcccacaaggc
tatcgccattatctgagcgtgctgcgtgatcagcgtccaccctcgggccggccactcgaa
catccggactgggtcatttgggcccgtgaagtcttgcaggcgttcgacactttccagttg
ctgtgcgccgtgcgcaaagggccgtggggtgtcgaaggtctgaatcaacgcatcaccgcc
gcgctgctcaaagcacgtctgatcgaaaatgatcagcaatggtacgaaggccgcccggta
ttgatgactcgcaacgactacggtctgggtttgatgaacggcgatatcggcatcgccctc
aagctgcccgagcgtgaaggccctgacgcaggcaaaccggtgttacgcgtggctttcccg
cgcaacgacggccagggcggcgttcgcttcgtattgccaagccgcctcaacgatgttgaa
accgtctacgccatgacggtgcacaagtcccagggctcggagtttgcccacacggcgctg
atcctgccggatgccttgaacccggtactgaacaaagaactgatctacaccggcattacc
cgggctaaacattggttcaccttgatcgaatcccgctccggcgtgtttgaagaagcggtg
cagcgcagggtcaaacgcctgagcgggctgatgctggaactggaggagggcgccgcgcct
cgggggtga
DBGET
integrated database retrieval system
