Pseudomonas tensinigenes: HU718_005015
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Entry
HU718_005015 CDS
T07620
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptz
Pseudomonas tensinigenes
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptz03016
]
HU718_005015 (truB)
Enzymes [BR:
ptz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HU718_005015 (truB)
Transfer RNA biogenesis [BR:
ptz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU718_005015 (truB)
Prokaryotic type
HU718_005015 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXI07056
LinkDB
All DBs
Position
1167935..1168852
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRADVEAALPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ttggggttcacctccaacgccgcgttgcagaaggttcgctggctgctcaatgccgagaag
gccggtcacaccggcagcctcgatccattggccaccggtgtattgccgctgtgctttggt
gaggccaccaagttctcgcaatacctgctcgattctgacaagggttacgaaaccctggcg
cagttgggcaagaccaccaccacggcagatgccgaaggtgaggttttgcaggagcgcccg
gtgaccgttggtcgcgccgatgtcgaagcggctctgccgaaatttcgtgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctgtacaagttggct
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaatta
ctggccttcgaaggcgatactgcgcgtcttgcggtggactgcagcaaaggcacttatatt
cgcaccctggtggaggatatcggtgagcaactcggttgtggtgcatacgtcgctgaattg
cgccgtacccaggccgggcctttcaccctggcgcagacggttaccctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgatcgcttcctgatgccatcggacagc
ggcctgctggattggccgttgctgcacttctccgaagcgagtgcgttctactggctcaat
ggccagccggtacgtgccccggatgctccgaagttcggcatggtacgggtacaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgtatcgcgccacgtcgt
ttgattcggtcagaatga
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