Pseudomonas tensinigenes: HU718_006700
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Entry
HU718_006700 CDS
T07620
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz03030
DNA replication
ptz03430
Mismatch repair
ptz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU718_006700 (dnaE)
03430 Mismatch repair
HU718_006700 (dnaE)
03440 Homologous recombination
HU718_006700 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptz03032
]
HU718_006700 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptz03400
]
HU718_006700 (dnaE)
Enzymes [BR:
ptz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU718_006700 (dnaE)
DNA replication proteins [BR:
ptz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU718_006700 (dnaE)
DNA repair and recombination proteins [BR:
ptz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU718_006700 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXI07383
LinkDB
All DBs
Position
1545690..1549211
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTAMNMPAVAVTDQNNMCSLVKFYKNTMGAG
IKPICGADLWLSNKDPDAPLSRLSLLVMNAKGYRNLTELISRGFIEGQRNGMIIVEREWV
AEANEGLIMLSAAKEGEIGMAMIGGNPAEAEVLAREWMAVFPDRFYLEIQRTNRPNDEEQ
LHGAVALADKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMIELFSDIPDAIENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYT
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDDGRIVYGLGAI
KGVGEGPVEAITEARQAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKSAEQTARTHDSGHADLFGGLFVEEDADVYAVHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGDLLKRHRGACPITMEYTSPDAKTL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcatttgttcatctacgcctgcacactgaatactccctggtcgacgggctg
gtgcggatcaagccgctggtcaaggcgctgacggccatgaacatgccggcggtcgcggtc
accgaccagaacaacatgtgttctctggtcaaattctataaaaacaccatgggcgcgggc
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaggacccggacgcaccgctg
agccggctcagcctgttggtgatgaacgccaagggttatcgcaacctcaccgagttgatc
tcgcgcggcttcatcgaaggccagcgtaacggcatgatcatcgtcgagcgcgagtgggtc
gcagaggccaacgaaggcctgatcatgctatccgccgccaaagaaggcgagatcggcatg
gccatgatcggcggcaacccggccgaagccgaagtgctggcgcgtgaatggatggcggtg
ttcccggatcgtttctatctggaaatccagcgcaccaaccgtcccaacgatgaagaacaa
ttgcacggcgccgtggccctcgccgacaaactgggcgcgccgctggtggcgaccaatgat
gtgcgcttcatcaagcaggaagactttgccgcccacgaaactcgcgtgtgcatcggtgag
ggccgcgccctcgacgatccgcggcgttcgaagaattacagcgatcagcaatacctgaaa
agcgccgaggagatgatcgagctgttcagcgatattcccgacgccatcgaaaacaccgtc
gaaatcgccaagcgctgcaacattgaagtgaagctgggcacgcactttttgcccaacttc
ccgattcccgatggcatgaccatcgacgaatatttccgcaaagtctccttcgacggtctc
gaagaacgcctgtcggtgctgctgcccaaagacactaccgaagactacgaagccaagcgt
caggtctacgtcgaccgcttgaatttcgaactggatatcatcatccagatgggcttcccc
ggttacttcctgatcgttatggactttatccagtgggccaagaacaacggcgtgccggta
ggtccgggccgtgggtcgggtgccggttcgttggtggcttatgtacagaagatcaccgac
ctcgatccgctggaatacgacctgctgttcgaacgtttccttaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggacggtcgtgaccgcgtgatcgattacgtg
gccgagaaatacggccgcaacgcggtaagccagatcatcactttcggttccatggccgcc
aaggctgtggtgcgcgacgtggcgcgggtacagggcaagtcctacggcctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaattctgcgtgacttcattaaggtcgatgaagaagctgcggaaatctgggagatggcg
cgcaagctcgaaggcgtggtgcgtaacgttggtaagcacgccggtggtgtggttattgcg
ccgaccaagctgactgacttttcgccgatctattgcgacgaggccggtgacggtctggta
acccagttcgacaaggacgacgttgaggcggccggtctggtgaagttcgacttcctcggt
ctgcggaccctgacgatcatcgactgggcgctgaaaaccatcaaccgtgatcgcgccaag
gtcaacgagccaccgctggatattgcgtttatcccgctggacgacaagccgacctacacg
ctgttgcagaaagccgaaaccactgcggtgttccagcttgaatcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccgggcccgctgcagtccggcatggtggatgacttcatcaaccgtaagcacggtcgc
gccgaattggcgtacccgcactcggattaccagtacgaagggttgaagcctgttctggcg
ccgacttacggcatcatcctgtatcaggaacaggtgatgcagattgctcaggtcatggcc
ggttacaccctcggcggtgcggacatgctccgtcgcgccatgggtaagaagaaacccgag
gaaatggccaagcagcgcggcggtttcattgaaggttgcgcgaccaacaatatcgacgcc
gacctcgccggtaacattttcgacctggtagaaaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtctcgtaccagactgcatggttgaaagcccactac
ccggcgccgttcatggctgcggtactttcagcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcacgatgaagctgcgcctcgacgcgccggacgtgaacact
tcggagttcaagttcacggtgaacgacgatggccgcatcgtgtatggcctcggcgcgatc
aaaggtgttggtgaaggcccggttgaggccattaccgaagcgcgtcaggccggtccgttc
aaggatctgttcgacttctgtgcccgtgtcgacctcaagcgcatcaacaaacgtacgctc
gacggtttgattcgtagcggtgcgctggatcgcctggggccgtatttccacgacgaacaa
aaagcctatcaggccaacatcgatcgcaaccgcgcggtgctgctggccgcgatggaggaa
gcgatcaaatccgccgaacagactgcccgcacccacgacagcggtcacgccgacctgttt
ggcggtttgtttgtcgaggaggacgccgacgtttacgcggtgcatcgcaaggccaaggag
ttgaccctcaaggagcgcctcaaaggtgagaaagacaccttgggcctgtacctgaccggt
cacccgatcgacgaatacgaaggcgagattcggcgtttcgcccgtcagcgcatcatcgac
ctgaaaccggcccgggatacgcaaaccgtggcggggatgatcattgccttgcgcgtgatg
aagaacaagaagggcgacaagatgggcttcatcaccctcgacgaccgctcggggcggatc
gaggcgtcgctgtttgccgatgcgttccattctgcgcaatcgctgttgcagaccgatgcg
atggtggtggtcgaaggcgaagtcagcaacgacgacttctccggtggcctgcgcctgcgg
gtcaaacgcgtgatgagcatggaagatgcgcgcaccaacctcgccgagagcctgcgcctg
aaactgcaaactcaggacctgaaaggcgatcagctacgctggttgggtgatttgctcaag
cgtcatcgcggcgcttgtccgatcaccatggagtacaccagcccggatgcgaagaccttg
ctgcagttcggcgagacgtggcgaattgatccggcggatgccttgattcaggctctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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