Pseudomonas tensinigenes: HU718_007495
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Entry
HU718_007495 CDS
T07620
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ptz
Pseudomonas tensinigenes
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptz03021
]
HU718_007495 (rapA)
Transcription machinery [BR:
ptz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU718_007495 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXI07534
UniProt:
A0ABX8Q1Y7
LinkDB
All DBs
Position
complement(1697887..1700733)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQQVDDVDGLMVYHGLNGQNEAVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASAEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESDNYRPVAEAVQELLDK
GRLSAKAHKTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGEHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDSEWQALIDEARSERERLE
AELHTGRDRLLELNSGGAGEGEALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSPRVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEDKIAPRHAERVAEARRRLAADTDEEL
ARLTALQAVNPTVRDSELVALREQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagcagagcttggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctttacccggccactggc
gaaacccgccagtacgcgctacggaatgcgcccctgacccgcgtgcgattctcgccgggc
gacagcatcacccacttcgaaggctggaagatgaccgtgcagcaagtcgacgatgtcgac
gggctgatggtctatcacggtctcaatgggcagaacgaagccgtcaccctgccggaaacc
cagctgtcgaacttcattcagttccgtctggccagcgaccgtctgttcgccgggcagatc
gacccgctggcgtggttctcgctgcgctacaacaccctcgaacacaccagccgccagttg
caatcttcgctctggggcctgggtggcgtgcgtgcgcaaccgatcgcgcaccaattgcac
atcgcccgtgaagttgccgaccgcattgcaccacgcgtactgctggcggacgaagtgggt
ctgggtaaaaccatcgaagccggtctggtgatccatcgccaactgctctcgggccgcgcc
aaccgcgtgctgatcctcgtcccggaaaacctccagcaccaatggctggtggagatgcgc
cgccgcttcaacctgcaggttgcgctgttcgacgaagaacgcttcatcgaaagcgatgcc
gccaacccgttcgaagacacccaactggcgctggttgcactggagtggctggtcgacgac
gagaaggcgcaagacgcactgttcgctgccggttgggatctgttggtagtcgacgaagcg
caccacctggtctggcacgaagaaaaggccagcgccgaatactcgctggtcgaacaactc
gccgaagtcatcccgggcgtgctgctgctcaccgccaccccggaacaactcggccaggac
agccacttcgcccgtctgcgtctgctcgatccaaaccgtttccatgacctggccgccttc
cgcgccgagagcgacaactatcgcccggtggccgaagccgttcaggagctgctcgacaag
ggccgtctctcggccaaagcgcacaaaaccattcagggtttcctcggcaacgaaggcgaa
gcgctgctgaccgcggtcaacgatggcgacaccgaagccagcgcgcgcctcgtgcgtgaa
ctgcttgatcgccacggcactggccgcgtgctgttccgtaacacccgcgccgccgtgcag
ggcttcccggaacgcaaactgcacccgtacccgctgccatgcccggacgaatacctcgaa
ctgccgctgggcgaacacgccgagctgtacccggaagtcagcttccaggcgcaaccggac
gccagcgaagaagagcgctggtggaaattcgacccacgcgtcgagtggctgatcgatcag
ctgaaaatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagatgccctgcgcgtgcgttccggcatcccggccacggtgttccatgaaggc
atgaacatccttgagcgtgaccgcgccgccgcgtacttcgccgacgaagagttcggcgca
caagtgctgatctgctcggaaatcggcagtgaaggtcgcaacttccagttcgctcaccac
ctggtgctgttcgatctgccgtcgcacccggacctgctcgagcagcgaatcggtcgtctc
gaccggatcggccagaagcacatcatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcactgaacgcgttcctcaacacctgcccg
accggcaacgccttgcagcatcagttcggcccgcgcctgctgccgttgctcgaagaagcc
gacgacagcgagtggcaagcgctgatcgacgaagcgcgcagcgagcgtgagcgtctggaa
gccgagctgcacaccggtcgtgaccgtctgctggaactcaactccggcggcgccggcgaa
ggtgaagcgctggtcgaggacatcctcgagcaagacgatcagttcgccctgccgatctac
atggaaaccctgttcgacgcgttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgagaagatgctcgacgccagtttccctctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttcgatgggcaac
accgccgtcgcgctgatcaagaacaaggcgttgaaaccgggcaccgtgctgcttgagctg
ctgtatgtcagcgaagtggtggcgccgcgttcgctgcaactgggccgttacctgccgcca
gctgctctgcgctgcctgctcgatgccaatggcaacgatctgtcgccacgcgtctcgttc
gaaacgctgaacgatcaactggaaagcgtgccacgcgccagcgccaacaagttcatccag
gcccagcgcgatcagctgacgccacggatcaacgccggtgaagacaagatcgccccgcgt
cacgccgagcgcgtggccgaggcccgtcgccgtctggcggccgacaccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgtgacagcgaactggtggcg
ttgcgtgaacaacgtgagcagggtctggcgatgctggataaagcggcgttgcgactggaa
gcgattcgggtgttggtggcgggctaa
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