Pseudomonas tensinigenes: HU718_012120
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Entry
HU718_012120 CDS
T07620
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU718_012120 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptz02044
]
HU718_012120 (tssC)
Secretion system [BR:
ptz02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU718_012120 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
Motif
Other DBs
NCBI-ProteinID:
QXI08409
UniProt:
A0ABX8Q404
LinkDB
All DBs
Position
complement(2748696..2750180)
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AA seq
494 aa
AA seq
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MPASAQKQASDNAAAETLSLLDRIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDK
DTVAMINDRISQIDELISAQLNEVLHHPDLQKLEASWRGLHMLVQNTETSTRLKLRLLNV
TQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLVGDYTFGRHPQDIGLLEKLS
NVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLV
LPHFLLRLPYGPDTSPVEGINYVEDVNGTDHSKYLWGNAAWALSQRITEAFAKYGWCAAI
RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAV
FFGGQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQS
YLNNWIADYVLINDNASQEIKAQYPLREARVDVTEVAGKPGAYRATVFLRPHFQLEELTA
SIRLVATLPPPVAA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcttcagctcagaaacaagccagcgacaacgccgcagccgagactttgtcgctg
cttgaccgaatcatcgccgaaggccgcatggcccacgatgacagtcagcaggattacgcc
cgcgacatgctcgcggagttcgccactcaggtcctcgacgaaggcatggccatcgacaag
gacaccgtggcgatgatcaacgaccgtatcagccagatcgacgaattgatcagcgcccag
ctcaacgaggtgttgcaccaccccgatctgcagaaactcgaagcctcgtggcgcggtctg
cacatgctggtgcagaacaccgaaaccagcacgcggctgaaactgcgcctgctcaatgtc
acgcagaaagagttgcagaacgacctggaaaaagccgtcgaattcgaccagagcgcgctg
ttcaaaaaaatctacgaagaagaatacggcaccttcggtggccatccgttcagcctgctg
gtcggtgactacaccttcggccgccacccgcaggacatcggcctgctggagaaactgtcg
aacgttgccgctgctgcgcatgcgccgttcatcgccgccgccagcccgcgcctgttcgac
atgaacagcttcaccgaactggccgtgccgcgtgatctgtcgaaggtgttcgagagccag
gagctgatcaagtggcgctcgttccgcgagagcgaagattcgcgctacgtgtctctggtg
ctgccgcatttcctcctgcgtctgccctacggccccgacacctcgccggtggaaggcatc
aactacgtcgaagacgtcaacggcaccgaccacagcaaatacctgtggggcaatgccgcg
tgggcgctgtcgcaacgcatcaccgaagccttcgccaagtacggctggtgcgcggcgata
cgtggcgctgaaggcggcggcgcggtggaaggtctgccagcgcatacgttccgcaccagc
tccggcgatttgtcgctgaaatgcccgaccgaagtggcgatcaccgatcgtcgcgagaaa
gagcttaacgacctcggtttcatcgccctgtgccacaagaaaaacagcgacgtcgcggtg
ttcttcggcggccagaccaccaacaaatccaaggtctacaacaccaatgaggccaacgcc
aacgcgcggatctcggcgatgctgccgtacgtgcttgccgcctcgcgtttcgcccattac
ctgaaggtgatcatgcgcgacaaggtcggcagcttcatgacccgcgacaacgtgcagagc
tacctcaacaactggatcgccgactacgtgctgatcaacgacaacgcgtcacaggaaatc
aaggcgcagtacccgttgcgtgaagcgcgcgtggacgtcaccgaagtcgccggcaagccc
ggcgcctaccgcgcgacggtgttcctgcggccgcacttccagctcgaagagctcaccgcg
tcgatccgcctggtggcgactttgccgccaccggttgctgcctga
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