Pseudomonas tensinigenes: HU718_014050
Help
Entry
HU718_014050 CDS
T07620
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptz
Pseudomonas tensinigenes
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptz03032
]
HU718_014050
03400 DNA repair and recombination proteins [BR:
ptz03400
]
HU718_014050
Enzymes [BR:
ptz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU718_014050
DNA replication proteins [BR:
ptz03032
]
Prokaryotic type
DNA Topoisomerases
HU718_014050
DNA repair and recombination proteins [BR:
ptz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU718_014050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI08768
LinkDB
All DBs
Position
complement(3184679..3185716)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTVLTADLPSDLHYVDDTQPGITRKKLRGKFCYFEPSGQRITDTDEIKRINALAVPPA
YIDVWICPDPQGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
ALLAAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDEQGERHTVSSSDVNAYLQTLTG
ADFTAKDYRTWAGSALALAVLRELKHESETEAKRHVVEMVKNVSRQLGNTPAVCRKCYIH
PAVVENFMLGTLAELPRPRVRKGLRAEEVALAMFLERMSDITTAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgtgctgactgccgacctgccatccgacctgcattacgtcgacgacacc
cagcccggtatcacccgcaagaaactgcgcggcaagttctgctacttcgagccgtcaggc
cagcgcatcaccgacaccgacgaaatcaaacgcatcaatgctctcgcggtaccgccagcc
tacatcgatgtgtggatctgccccgatccgcaaggtcatttgcaagccaccggccgtgat
gcccgtggccgcaagcaatatcgttatcacgctcgctggcgcgaagtgcgcgatgccgat
aaatattcgcggctgcgcgagttcggtctggccttgccaaaactgcgcaagcaactggaa
gcgttgttggccgcgcccggcttcagtcgcgacaaggtcatggccaccgtaatcaccctg
ctcgacgccacgctgattcgggtcggcaacacgcaatacgcccgcgacaaccgctcctac
ggcctgaccaccctgcgcagccggcatgtcgaagtcaacggcagtgcgattctgtttcag
tttcgcggcaagagcggcatcgaacaccagatcaccgtcaaggatcggcggctggcgcgg
attatcaagcgctgtctggagattcccgggcagaacctgtttcagtatctggatgaacaa
ggcgagcgacacaccgtcagctcttccgacgtcaacgcctacctgcaaaccctgaccggt
gccgacttcaccgccaaggactatcgcacctgggctggtagcgccctggcgttggcggta
ttgcgcgaactcaagcatgaatccgagaccgaggccaaacggcatgtggtggagatggtg
aaaaatgtctccaggcagttgggtaacaccccggcggtgtgtcgcaagtgctatatccac
ccggcggtagtggagaatttcatgctcggcaccctcgccgaattaccgcgcccccgcgtg
cgcaaaggcctgcgcgccgaagaagtggctttggcaatgtttcttgaacgcatgagcgac
atcaccaccgcgccttga
DBGET
integrated database retrieval system
