Pseudomonas tensinigenes: HU718_015560
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Entry
HU718_015560 CDS
T07620
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU718_015560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptz03021
]
HU718_015560
Transcription machinery [BR:
ptz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU718_015560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_11
DUF2285
HTH_28
HTH_29
HTH_38
TnsD
Xre-like-HTH
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QXI03462
LinkDB
All DBs
Position
complement(3549198..3549707)
Genome browser
AA seq
169 aa
AA seq
DB search
MTEAATPSPQHLHELYRDHRGWLETWLRRRMGNAWDAADLSQDTFLRVLCSAQPIADMRE
PRAYLLTVGKRLLSNFYTRRSLEKAYLEALAQLPEECVPSPEQRWLLLETLQALDELLDG
LPRAVRRAFLLSQLEGLGYREIAERLQVSERSIKRYMAMAYEHCLMLDL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcagcgacgccatcgccgcagcacctgcacgaactgtatcgcgatcaccga
ggatggctggaaacctggttgcggcggcgcatgggcaatgcctgggacgcggcggacctg
agccaggataccttcttgcgcgtgctgtgcagcgctcagccgattgccgatatgcgtgag
ccgcgggcgtatttgctgacagtcggcaaacgcctgctgagcaatttctacacccgccgc
agtctggaaaaggcctatctcgaagccctcgcgcaattgcccgaagaatgcgtgccgtcg
cccgagcaacgttggctgctgctggaaaccctgcaagcgctggatgagctgctcgatggt
ttgccgcgagcggtgcgtcgggcctttctcctgagtcagctcgaaggcctcggttaccgt
gaaattgccgaacgtttgcaggtttccgagcgcagtataaaacgttacatggcaatggct
tacgagcattgtttgatgctggatctatga
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