Pseudomonas tensinigenes: HU718_016980
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Entry
HU718_016980 CDS
T07620
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ptz
Pseudomonas tensinigenes
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptz03009
]
HU718_016980
Ribosome biogenesis [BR:
ptz03009
]
Prokaryotic type
ribosomal protein modification factors
HU718_016980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QXI03729
LinkDB
All DBs
Position
complement(3839693..3841891)
Genome browser
AA seq
732 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISEKDRLGILRSIDRCTVKKVVQT
GPEFIIEEVENLDADAQALLMPVAGSDAGTFIAGKDLPLEQTIANMSGILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
IANAEFVHYPDEQWFKPGPKDELPSEILDEYTRKIYNRDGELRGSNLFDTNSGNTQRGIC
SLPFVRQSDNEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
ALPDVPQEVLEKYPSILAGIKGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
FSAKPDFEFVEWDFSGQGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDY
SEIYPVEDLIWDNTNKALQFRADILNLHNLSKVGLRNLAQGLENSEQDDYTEITTLIGIE
FDDNTPWGKLTILELRLLICLALQKYEQAKDLVEAFLQYNDNTVERGLFYQAVNVVLEME
LDEDLELEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
KLHTARANVKQV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtgatcgccgatcagcccatccgctacaagggcgatggctcggcaccggggccgttc
gactattttctggcatcgtcggcgttgtgtgcggcgtactttgtgaagttgtactgcgac
acgcgcaatatcccgacggaaaacattcgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgagttgccggcggacatctctgagaaa
gatcgcctgggcatcctgcgttccatcgatcgctgcacggtgaagaaggtcgtgcagacc
ggcccggaattcatcattgaagaagtcgaaaacctcgacgccgatgctcaggcgctgttg
atgccggtggccggttccgacgcaggcaccttcatcgccggcaaggacctgccgctggag
cagaccatcgccaacatgtcgggcattctcgccgatctgggcatgaagattgaaatcgcc
tcgtggcgcaacatcgtgcccaacgtctggtcgctgcacatccgcgatgcgcattcgcca
atgtgcttcaccaacggcaagggcgcgaccaaagagggcgcactggcctcggcattgggc
gagttcatcgagcgcctgaactgcaatttcttctacaacgaccagttctggggcgaagag
atcgccaacgccgagttcgtccactatccggacgagcaatggttcaagccgggcccgaaa
gacgagttgccgagcgagatcctcgacgaatacacccggaagatttacaaccgtgacggc
gagttgcgtggctcgaacctgttcgacaccaactccggcaacacccagcgtggcatctgc
tcgctgccgtttgtgcgccagtcggacaatgaagtggtgtacttcccgtccaacctgatc
gaaaacctttacctgagcaacggcatgagcgccggcaacacgctcgccgaagcgcaggtg
cagtgcctgtcggagatcttcgagcgcgcagtcaaacgcgaaatcctcgaaggcgaaatg
gccctgccggacgtgccgcaagaagtgttggagaagtacccgagcatcctcgctggcatc
aaaggcctggaagagcagggcttcccggtgctggtcaaggatgcgtcgctgggcggtgaa
ttcccggtgatgtgcgtgaccctgatgaacccacgcaccggcggcgtgtttgcctcgttc
ggcgcgcatccgagcctggaagtggcgctggaacgcagcctcaccgagctgttgcagggt
cgcagtttcgaaggcctcaacgacttgccgcagccgacgttctccggtcaggcggtcacc
gagccgaataactttgtcgagcactttatcgactccagcggcgtggtgtcgtggcgcttc
ttcagcgccaagccagacttcgaattcgtcgagtgggacttctcaggccagggcgaaaac
tccaacgccgaagaagccgcgacgctgttcggcatccttgaagacatgggcaaggaagtc
tacatggcggtctacgagcacatcggtgccaaggcctgccgcattctggtgccggactac
tcggagatctacccggtcgaagacctgatctgggacaacaccaacaaagccctgcaattc
cgcgccgacatcctcaacctgcacaacctgagcaaagtcggcctgcgcaacctcgcccaa
ggcctggaaaacagcgaacaggacgattacaccgagatcaccacgctgatcggcatcgag
ttcgacgacaacacgccgtggggcaagttgaccattctggaattgcgcttgctgatctgc
ctcgcgctgcagaagtacgagcaagccaaggatctggtcgaagccttcctgcagtacaac
gacaacaccgttgagcgcggcttgttctatcaagcagtcaacgtggtgttggagatggaa
ctggacgaagatctggaactggaagactacgaagccaacttccgccgcatgtttggcgac
gagcgtatggatgctgcgattggttcggttaacggcagcgtgcggttctatgggttgacg
ccgaccagcatgaagctggaagggctggatcggcatttgcgcttgatcgagagctataag
aagttgcatacggcgcgggcgaatgtgaagcaggtttaa
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