Pseudomonas tensinigenes: HU718_018265
Help
Entry
HU718_018265 CDS
T07620
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ptz
Pseudomonas tensinigenes
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptz01002
]
HU718_018265
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptz01011
]
HU718_018265
Peptidases and inhibitors [BR:
ptz01002
]
Cysteine peptidases
Family C82
HU718_018265
Peptidoglycan biosynthesis and degradation proteins [BR:
ptz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HU718_018265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QXI03977
LinkDB
All DBs
Position
complement(4153556..4155172)
Genome browser
AA seq
538 aa
AA seq
DB search
MFKKYACYLSICLLAAPFVACADEPLPPLETLPTPPAEMPVEPQSPLQAVLISLPQSCPA
IAAQLNGPALTQLQAFYQQQDWMPVWASESARLPMLQAQLQLLADDGLNPKRYPVATTAP
QDGELCADIDISRNYLQALQDLHYGSLLQSHFEPLWHADATPRDRQAELLAIAVPGMHDI
PAAFDLARPRLAQYQDLRQLYAAQRLKALPQWQSVGNGPLLRPDMEDQRVPELAQRLYSE
GYLTQIIGTPGNAYDGVLVDAVKSFQANHSLQADGVVGPGTIAELNITPLTRREQLRVNL
ERFRWMSQDMEPNGLLVNVAAAELTLYQGGVPVWQTRTQVGRAERQTPLLKSRVTRLTLN
PTWTVPPTIWKEDKLPEIRKDQTFLSRQNLQVLDANGQPLAAADIDWDNPGNIMLRQDAG
PRNPLGQMVIRFPNPFSVYLHDTPSKALFEKGPRAFSSGCVRVEHPMQLRDLLLTPAEKA
RTETLLATGTTHEFRLSAPVPILMTYWTAQVDSAGHVRYSPDIYSRDSALLVGLDRAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtacgcatgctacttgagcatttgtttgctcgctgcgccgtttgtcgct
tgtgccgatgagccgttgccgccgctggagacattgccaacgccaccggccgagatgccg
gtcgagccgcaaagtccgttgcaggctgtcttgatcagcctgccgcagtcgtgcccggcg
attgcggcacagctcaacggcccggcgctgacgcaactgcaagccttctaccagcagcag
gactggatgccggtgtgggcgagtgaatctgcgcgattgccgatgttgcaggcacaatta
cagctgttggccgatgatggtctcaatccaaagcgctatccggtcgcgaccacggcgcct
caggatggcgagttgtgtgccgacatcgatatcagccgcaactacctccaggccctgcag
gatctgcattacggaagcctgctgcaatcacacttcgaaccgctgtggcatgccgacgcc
accccgcgtgaccgtcaggcggaattgttggcgatcgccgtaccgggcatgcacgacatt
cccgctgcgttcgacctggcgcggccgcgtctggcgcaatatcaggatctgcgtcagctg
tacgcggcgcaacggctcaaagccttgccgcaatggcaatcggtgggcaacgggccgcta
ctgcgcccggacatggaagaccaacgcgtgccggaactggctcagcgtctgtacagcgaa
ggctatctgactcagatcattggtacacccggcaatgcgtatgacggcgttctggtcgac
gcggtgaagagttttcaggccaaccattcgctccaggctgatggcgtggtcggaccgggg
acgattgccgaactcaacatcactccgctgacgcgccgtgaacaactgcgggtcaatctc
gaacgtttccgctggatgtcccaggacatggaacccaatggcctgctggtcaacgtcgcc
gccgctgaactgacgttgtatcagggcggcgtgcccgtatggcagacccgtacccaggtc
ggccgtgccgagcgccagaccccgttgctgaagtcccgtgtcacgcgcctgaccctgaat
ccgacctggaccgtgccgccgaccatctggaaggaggacaaactgccggagatccgcaag
gatcagaccttcctcagtcgacagaacctgcaggtgctcgacgccaacggacagccgctg
gcggcagcggacatcgattgggacaaccccggcaacatcatgctgcgtcaggatgccggg
ccgcgtaatccgctggggcaaatggttatccgctttcccaacccattttcggtgtacctg
cacgacacgccaagcaaggcgctgttcgaaaaaggcccgcgggccttcagctccggttgc
gtgcgcgtcgagcacccgatgcagctgcgcgatctgctgctgaccccggcggaaaaggcc
cgcaccgaaaccttgctggccaccggcaccacccacgaatttcgcttgtcggcgccagtg
ccgatcctgatgacctactggaccgcgcaggtcgacagcgctggccatgtgcgctattcg
ccggacatctacagtcgcgacagcgccttgctcgtcgggcttgatcgcgcgcattga
DBGET
integrated database retrieval system
