Pseudomonas tensinigenes: HU718_020820
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Entry
HU718_020820 CDS
T07620
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz00071
Fatty acid degradation
ptz00280
Valine, leucine and isoleucine degradation
ptz00310
Lysine degradation
ptz00362
Benzoate degradation
ptz00380
Tryptophan metabolism
ptz00410
beta-Alanine metabolism
ptz00640
Propanoate metabolism
ptz00650
Butanoate metabolism
ptz00907
Pinene, camphor and geraniol degradation
ptz00930
Caprolactam degradation
ptz01100
Metabolic pathways
ptz01110
Biosynthesis of secondary metabolites
ptz01120
Microbial metabolism in diverse environments
ptz01200
Carbon metabolism
ptz01212
Fatty acid metabolism
Module
ptz_M00087
beta-Oxidation
ptz_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU718_020820 (fadB)
00650 Butanoate metabolism
HU718_020820 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU718_020820 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU718_020820 (fadB)
00310 Lysine degradation
HU718_020820 (fadB)
00380 Tryptophan metabolism
HU718_020820 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU718_020820 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU718_020820 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU718_020820 (fadB)
00930 Caprolactam degradation
HU718_020820 (fadB)
Enzymes [BR:
ptz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU718_020820 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU718_020820 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU718_020820 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU718_020820 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI04472
UniProt:
A0ABX8PT04
LinkDB
All DBs
Position
complement(4725250..4727397)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIASGKENRPEDAL
KVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNAIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGQVK
EGTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgttccgaccgttgtggccatcaatggcatcgcgctgggcggcggcctggaa
atgtgcctggcggctgactatcgcgtcatgtcgaccaaggccaagatcggtctgccggaa
gtcaaactgggcatctacccaggcttcggtggcaccgtgcgtctgccgcgtctgatcggt
gtcgacaacgccatcgaatggattgcctccggtaaggaaaaccgccctgaagacgccctg
aaagtcagcgccgtcgacgccgtggttgctcctgaaaaactgcaggaagctgcccttgaa
ctgatcaagcgcgccatctccggcgagttcgacttcaaggccaagcgtcagccgaaactt
gaaaaactcaagctgaacgccattgaacagatgatggctttcgaaaccgccaaaggtttc
gtcgccggtcaagcgggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagctgccggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaagacgtgaagcaggccgctgtactc
ggcgccggcatcatgggcggtggtatcgcttatcagtcggcctccaaaggtacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcagggtctggccgaagccgccaagctg
ctggttggccgcgttgataaaggtcgcatgaccgctgcaaaaatggctgaagtgctaaac
gccattcgtccgaccctgtcctacggcgatttcggtcacgtcgatctggttgtcgaagct
gtcgtcgagaaccctaaggtcaagcaagccgtgttggctgaagtggaaggtcaggtcaaa
gagggcaccatcctcgcgtccaacacttcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgatccgtggcgagaagtcgagtgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgtccgtatcgacaaggtcatggaaaaattcggctggccgatgggcccggcatacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtaatggctgaaggtttc
ccggatcgcatgaaggatgaccgtcgttcggccatcgacgtgctttacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcttacgaggccgacaagaaaggcaagcag
aagaaagtcgccgatccatcggtgctggaagtgctcaagccgatcgtttacgagcagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgctgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaaactgcgtgaaatggccaaaaccggccaacggttcttcggttaa
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