Pseudomonas tensinigenes: HU718_029480
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Entry
HU718_029480 CDS
T07620
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz00300
Lysine biosynthesis
ptz00470
D-Amino acid metabolism
ptz01100
Metabolic pathways
ptz01110
Biosynthesis of secondary metabolites
ptz01120
Microbial metabolism in diverse environments
ptz01230
Biosynthesis of amino acids
Module
ptz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU718_029480 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU718_029480 (lysA)
Enzymes [BR:
ptz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HU718_029480 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXI06093
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Position
6601206..6602453
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AA seq
415 aa
AA seq
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MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFLDALDRLLDLVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLNGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDTAARKYDIVGPICETGDFLAKDRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtggcggggagctgttcgcggaaggcgtggcgctgtcagcc
atcgccgaccgtttcggcacgcccacttatgtttattcgcgcgcgcacatcgaagcccag
tatctggcctacgccgatgcgctggccggcatgccacatctggtttgcttcgcggtcaaa
gccaactccaacctcggcgtgctgaatgtcctggcccgtctcggggccggtttcgacatc
gtttcccgtggtgagctggaacgcgttctcgccgctggcggcagtgctgacaagatcgtc
ttctccggtgtcggcaagacccgtgacgacatgcgtcgcgcactggaagtcggcgtgcac
tgcttcaacgtcgaatccaccgatgagctcgagcgcctgcaagtggttgccgccgaactg
ggcgttcgcgcaccggtgtcgctgcgggtgaacccggacgtcgatgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccatcgccgacgccgaagac
gtgtacgtgcgcgccgcgcatctgccgaacctcgaagtggtcggcgtcgactgccacatc
ggttcgcaactgaccacgctgccaccgttccttgatgcccttgatcgcctgctggatctg
gtcgatcgcctcggcgactgcggcattcacctgcgccacatcgatcttggtggtggtttg
ggcgtgcgttatcgcgatgaagagccgccattggctgccgactacatcaaagccgtacgc
gagcgtctcaacggtcgtgatctggcgctggtgttcgagccgggccgtttcatcgttgcc
aacgccggcgtgctgctgacgcaggtcgagtacctcaagcacaccgaacacaaagatttc
gccatcgtcgacgcggcaatgaacgacctgattcgcccggcgctgtatcaagcgtggatg
gacgttaccgcggtcaaaccgcgtgacaccgctgcgcgcaaatacgacatcgtcggcccg
atctgcgaaaccggcgacttcctcgccaaggatcgcgaactggccctggccgaaggcgat
ctgctggccgtgcattcggccggtgcctacggttttgtaatgagttccaactacaacacc
cgtggccgtgcggccgaagtgctggtagacggtgaccaggtttttgaagtgcgccgccgc
gaaaccgtggctgagctgtttgccggcgaaagcctgctgccggagtaa
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