Pseudomonas tensinigenes: HU718_029485
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Entry
HU718_029485 CDS
T07620
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz00300
Lysine biosynthesis
ptz00470
D-Amino acid metabolism
ptz01100
Metabolic pathways
ptz01110
Biosynthesis of secondary metabolites
ptz01120
Microbial metabolism in diverse environments
ptz01230
Biosynthesis of amino acids
Module
ptz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU718_029485 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU718_029485 (dapF)
Enzymes [BR:
ptz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HU718_029485 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QXI06094
UniProt:
A0ABX8PY25
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Position
6602457..6603287
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFEAPAQASSYQLEVDGTTVELAAVSMGNPHAVLRVQDINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LVDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttactaaaatgcacggcttgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattcagccaaagcacgccaagcaatggggcgaccgccacacc
ggtatcggtttcgaccagttgctgatcgtcgaggcgccgagcaacccggacgtggatttc
cgttaccggatcttcaattccgatggctcggaagtcgagcagtgcggcaacggtgcgcgc
tgttttgcgcgcttcgtgctcgacaagcgtctgaccgccaaacggcagattcgcgtcgag
accaagggcggcatcatcgaactggacgtgcgtaacgacggccagatcggcgtaaacatg
ggcgccccgcgcctggtgccggcggacattccgttcgaagcgccggcgcaggccagcagc
tatcagctggaagtcgacggcaccacggtcgaactggccgccgtgtcgatgggcaacccg
catgcggtattgcgcgtgcaggacatcaacagtgcaccggtgcatgaactggggccgaaa
atcgaacaccatccgcgcttcccagcgcgagtgaacgtcggttttctccaggtcatcgac
cgcaaccgtgcgcagttgcgcgtgtgggaacgcggtgctggggaaacccaggcctgcggt
accggtgcctgtgcagcggctgtcgctgcgatcagccaagggtggatggattcgccgcta
ttggtcgacctgcccggcgggcgtctgtccattgaatgggcaggccctggccaaccggta
ctgatgaccggtccggcagtgcgtgtatacgaaggacaagtgcgtctttga
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