Candidatus Pelagibacter ubique: SAR11_0010
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Entry
SAR11_0010 CDS
T00257
Symbol
thyX
Name
(GenBank) thymidylate synthase-complementing family protein (Pfam)
KO
K03465
thymidylate synthase (FAD) [EC:
2.1.1.148
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00240
Pyrimidine metabolism
pub00670
One carbon pool by folate
pub01100
Metabolic pathways
pub01232
Nucleotide metabolism
Module
pub_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SAR11_0010 (thyX)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAR11_0010 (thyX)
Enzymes [BR:
pub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.148 thymidylate synthase (FAD)
SAR11_0010 (thyX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thy1
ENT
Motif
Other DBs
NCBI-ProteinID:
AAZ20835
UniProt:
Q4FPM5
LinkDB
All DBs
Position
complement(9267..10301)
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AA seq
344 aa
AA seq
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MVITKFVYRRSWQANTITIKAFERDSIKIMKLTKEQSQEIKDQQGQQNQTKRVTAPALEN
ILYEAMPALDHGFVRVIDYMGDDTSIVQSARVSYGKGTKQVSTDAGLIKYLMRHWHSTPF
EMCEIKYHVKLPIFIARQWIRHRTANVNEYSARYSILDKEFYLPSAENLAAQSSSNRQGR
GDVIEGEQAKEVLELLKNDAEQTYDNYEMMLNQRFDGSTIDENKKGLARELARMNLTLNT
YTQWYWKTDLLNLMNFLRLRADSHAQYEIRVYADIMLDTVKKWVPITYDAFMDYRVGGTE
VSAKGKIIIQKLIKGEDVNPDSSGLSKREWNELMVSFDLKDKLI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggttattacgaaattcgtttatcgtcgtagttggcaagccaacactattactataaaa
gcatttgagagagattcaataaaaatcatgaaattaactaaagaacaatcacaagagatc
aaagatcaacaaggtcagcaaaatcaaacgaaaagggttactgccccagcgcttgaaaat
attctgtatgaggcaatgccagcattagaccatggttttgtaagagttattgattacatg
ggagatgacacttcaattgttcagtcagctagagtttcgtatggaaaaggaaccaaacaa
gtttcaacagatgcaggtttaattaaatatttaatgagacattggcacagcactccattt
gaaatgtgtgaaatcaaatatcatgtgaagcttccaatttttattgctcgtcaatggata
agacatagaacagcaaatgttaatgagtactcagctaggtattcaattttagataaagaa
ttttatttgccatctgcagaaaatttagcagctcaatcttcaagcaacagacaaggtaga
ggtgatgttattgaaggtgaacaagcaaaagaagttttagaacttttaaaaaatgatgct
gaacaaacttatgacaactatgagatgatgctcaatcaaagatttgatggatcaacgatt
gatgaaaataaaaaagggttagcaagagaacttgcaagaatgaatttaactttaaacact
tatacccagtggtattggaaaactgatttattaaacttaatgaattttttaagattaaga
gctgatagtcatgctcagtatgaaataagagtttatgctgacatcatgttagatactgtt
aagaaatgggtacctataacttatgatgcgttcatggattatagagtagggggcacagaa
gtttcagctaaaggaaaaattatcattcaaaaacttattaaaggtgaggatgttaatcca
gatagttcaggcttatccaaaagagaatggaatgaacttatggtttcttttgatcttaaa
gataagttgatttaa
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