Candidatus Pelagibacter ubique: SAR11_0114
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Entry
SAR11_0114 CDS
T00257
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC family
KO
K03529
chromosome segregation protein
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pub03036
]
SAR11_0114 (smc)
Chromosome and associated proteins [BR:
pub03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SAR11_0114 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
YfdX
Motif
Other DBs
NCBI-ProteinID:
AAZ20938
UniProt:
Q4FPF1
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Position
124499..127072
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AA seq
857 aa
AA seq
DB search
MEFKKIQLNGFKSFAEKTNFLIEHGLTGIVGPNGCGKSNIVESLRWVMGETSAKSMRGSG
MEDVIFNGTSNKSSKNIAEVSISVDNASHDGPMQYKDLDHIEVRRKIEKDKGSKFYINDK
EVRARDAQMFFADLSTGAHSPSMISQGRIGALVTAKPTDRRAILEEAANISGLHVRRHEA
ELRLNAAETNLKRADELRRQQEKQLANLQKQAEEATKYKLISEEIKKIEAGLYYLKLLDI
DNEIRIENEINNEAEGEVSNFNQQIAQFENLIKTETDKVSPLREKNIENLSKIQRLNLEL
QNLDEENVRTQDEIENIKKSLKTIEEDIDREKGIVIDANSNERRLKEEKAELIEIDSKYF
ETEKLSNEDLEKAKNLLKDEQKSVDEIINIFADGNINIAIGPIKNVKNTITRAKELINNN
EINQALTLLDRCQIEIDGFLDNLEDEESKKKLSNINEKNENIKLLQEKYADSFSKNQSIK
KESVKRNERIKAIESEVESWKNLLSNSEKMVTELTERKNKLLSQLNERDQQPKAQAERKG
QITEGLRISQNEKIENEKIIEETDKKINSLRLELNDVQERSIQIRERKASSGATVEGLKK
RKEDLLERVSSELNLEENDILENSNLNGVEELPDSVAQEDALDKKKNEREKLGSVNLRAD
EETSKYEIEIKKMEQDREDLVSAIIKLKESINELNQKGRERLLEAFEKVNRKFNEVYTKL
FNGGNAKLELVDSDDPLEAGLEMLVSPPGKRLQSITLLSGGEQALTALSLIFAVFLTNPS
PICVLDEVDAPLDDANVTRFCGLLDDLTKITDTKFIIVTHHALTMSKMNRLYGVTMPEKG
ISQLVAVDLQKAESMVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaaaaaatccaattaaacggatttaaatcatttgctgaaaaaacaaatttt
cttatagagcacggcttaaccggcatcgttggtccaaacggttgtgggaaatctaatatt
gtggaatccttaagatgggttatgggtgaaacctcagctaagagtatgcgtggttcaggt
atggaagatgttatctttaatggcacatctaataaatcttctaaaaatatagcagaggtt
tctattagtgtagataatgcaagtcatgatggtccaatgcaatataaagatttagatcat
attgaagttagaagaaagattgaaaaagataagggttcaaaattttatataaatgacaaa
gaagttagagctagagacgctcaaatgttttttgcagatttatctacgggtgctcattca
ccatcaatgattagtcagggacgaattggagctttagtaactgctaagcctactgacagg
cgtgcaatcttggaggaagcagctaatatttcagggttacatgtgagaagacatgaggct
gaacttagattaaatgctgcagagacaaacttaaaaagagctgatgaattaagaagacaa
caagaaaaacaattagcaaaccttcagaaacaagctgaagaggcaacgaaatataaactt
atatctgaagaaataaaaaaaattgaagcggggctatattatttaaaattattagacatt
gataatgagattagaatagaaaatgaaattaacaatgaagctgaaggagaggtaagtaac
ttcaatcaacagattgctcaatttgaaaatttaattaaaactgaaacagataaagtttct
cccttaagagaaaaaaatatagaaaatctatccaaaattcaaagattgaatttagagcta
caaaatttagatgaagaaaatgttagaactcaagatgaaattgaaaatattaaaaaatcc
ttaaaaactatcgaggaagatatagacagagaaaaggggattgtaattgatgctaactca
aatgaaagacgcctaaaagaagagaaagctgaattaatagaaatagattctaaatatttt
gaaacagaaaaattatcaaacgaagatcttgagaaggcaaaaaacctattaaaagatgaa
caaaaatctgttgatgaaattattaatatttttgctgatggaaatataaatattgctatt
gggccaattaaaaatgttaaaaatacaatcaccagagctaaagaattgattaataacaat
gaaattaatcaagcgcttactttacttgatagatgtcaaattgaaatagatggtttttta
gataatcttgaagatgaagagagtaagaaaaagctttctaatattaatgaaaaaaatgaa
aatataaaattattgcaagaaaaatatgctgatagttttagtaaaaatcaatcaataaaa
aaagagtctgtaaaaagaaatgaaagaattaaagctatagaatcagaagttgaaagttgg
aaaaacttactctctaattctgaaaaaatggtaacagaattaactgaaagaaaaaataaa
ttactatcacagttaaatgagcgtgatcaacaacccaaagcccaagcagaaagaaaaggg
caaattactgagggtctaagaatttcacaaaatgaaaaaattgaaaatgaaaaaataatt
gaagaaacagataaaaagataaactctttaagacttgagttaaatgacgttcaagaaaga
tctattcaaatcagagaaagaaaagcaagctcaggagcaactgtcgaaggtttaaaaaaa
cgtaaagaagatctgttagaaagagttagttctgaacttaatcttgaagaaaatgatatt
ctagaaaattctaatttaaatggtgttgaagagctacctgactctgttgcacaagaagat
gctttagataaaaaaaaaaatgaaagagaaaaattgggatcagttaaccttagagctgat
gaagaaaccagtaaatatgaaatagaaattaaaaagatggaacaagatagagaagatctt
gtatctgctattataaaattaaaagaaagtattaatgaattaaatcaaaaaggaagagaa
agactgttagaagcttttgaaaaagttaatagaaaatttaatgaagtttatacaaaacta
tttaacggtggaaatgcaaaactagagttagtagattctgatgacccacttgaagctggt
ttagaaatgctggtaagtcctcctggtaaaagacttcagtctataactttattatctggt
ggtgaacaagctttaacagccttgtctcttatttttgcagtgttccttactaacccatct
ccaatctgtgttttagatgaggttgatgctccactagatgatgctaacgtaacaagattt
tgtggacttcttgatgatttaactaaaataactgacactaaatttattatcgtaactcac
catgctctaactatgtcaaaaatgaatagactttatggagttacaatgcctgaaaaaggt
attagccaacttgttgctgttgatttacaaaaagcagagagcatggttgcttaa
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