Candidatus Pelagibacter ubique: SAR11_0242
Help
Entry
SAR11_0242 CDS
T00257
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00020
Citrate cycle (TCA cycle)
pub00190
Oxidative phosphorylation
pub00650
Butanoate metabolism
pub00720
Other carbon fixation pathways
pub01100
Metabolic pathways
pub01110
Biosynthesis of secondary metabolites
pub01120
Microbial metabolism in diverse environments
pub01200
Carbon metabolism
Module
pub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pub_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pub_M00149
Succinate dehydrogenase, prokaryotes
pub_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAR11_0242 (sdhB)
00650 Butanoate metabolism
SAR11_0242 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SAR11_0242 (sdhB)
00720 Other carbon fixation pathways
SAR11_0242 (sdhB)
Enzymes [BR:
pub01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SAR11_0242 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer2
Fer4_18
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
AAZ21063
UniProt:
Q4FP26
LinkDB
All DBs
Position
complement(244386..245159)
Genome browser
AA seq
257 aa
AA seq
DB search
MVQINLPKNSEVQKGNYYQDKTGSKNIRKVNVYRWDPSNGENPRVDTYEVDMDNCPSKVL
DILNKIKNEIDPSLAYRRSCAHGVCGSCAMNMDGKNGLACTKPHSEIEGDINIYPLPHLK
VKKDLIGDLSGLYKQYESIEPWLKTNTKVETTEILQTKEDRVKLDGAYECIMCACCSTSC
PSYWWNGDKYLGPAVLLQAYRWIVDSRDDEKKERLKKVADELKLYRCHTIMNCTNACPKG
LNPAKAIAELKKMLATS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggttcaaataaatttacctaaaaattcagaagttcaaaaaggcaactattaccaagat
aagactgggtcaaaaaatattagaaaagtaaatgtttacagatgggatccctcaaatgga
gaaaacccaagagtagatacctatgaagtggatatggataattgtccttcaaaagtatta
gatattttaaataaaattaaaaacgaaattgacccatcattagcttatcgtagatcgtgt
gcacatggagtttgtggatcttgtgcaatgaatatggatggtaaaaatggtttagcatgt
acaaagcctcattcagaaattgaaggtgatataaatatttatccattacctcatttaaaa
gttaaaaaagatttaattggtgatttaagtggattatacaaacagtatgaatcaatcgag
ccatggctaaaaacaaatacaaaagttgaaaccactgagatattacaaactaaagaagac
agagtaaaattagacggtgcatatgaatgtatcatgtgtgcatgctgctcaacatcttgt
ccaagttattggtggaatggtgataaatatttaggtcctgcagttttacttcaggcttat
agatggatagttgatagtagagatgatgaaaaaaaagagagattaaaaaaagtagctgat
gagcttaaactttatagatgtcatactattatgaattgtactaatgcttgtccaaaggga
ttaaatccagcaaaagctatagctgaattgaaaaaaatgcttgcaacaagctaa
DBGET
integrated database retrieval system
