Candidatus Pelagibacter ubique: SAR11_0252
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Entry
SAR11_0252 CDS
T00257
Symbol
leuC
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00290
Valine, leucine and isoleucine biosynthesis
pub00660
C5-Branched dibasic acid metabolism
pub01100
Metabolic pathways
pub01110
Biosynthesis of secondary metabolites
pub01210
2-Oxocarboxylic acid metabolism
pub01230
Biosynthesis of amino acids
Module
pub_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
SAR11_0252 (leuC)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
SAR11_0252 (leuC)
Enzymes [BR:
pub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
SAR11_0252 (leuC)
4.2.1.35 (R)-2-methylmalate dehydratase
SAR11_0252 (leuC)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
AcnX
aBig_2
Motif
Other DBs
NCBI-ProteinID:
AAZ21074
UniProt:
Q4FP15
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All DBs
Position
complement(255662..257065)
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AA seq
467 aa
AA seq
DB search
MPLTLYDKIWNDHLVDQQDDGTALLFVDRHLVHEVTSPQAFEGLRNSNRKVRQPGLTLAV
ADHNVPTTDRSKGIADAESKIQVDTLESNCKEFGVQYLGMNDKRQGIVHIIGPEQGFTQP
GTVIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLVQKKAKNFRINVNGKLPIGVTS
KDVILQIIGQIGTAGGTGSVIEYAGSLISSLSVEQRMTICNMTIEGGARAGLIAPDEKIF
EYLKGKPMSPKNENWDKAMKYWESLKTDDGAKFDKEINLVAEDILPMITWGTSPQDVITI
DGKVPNPKNEQDEDKKNSLERSLNYMGLKADTLATDIKIDKVFIGSCTNGRIEDLREAAK
ILKDKKKASHVQAMVVPGSGLVKEQAEQEGLDKIFIASGFEWREPGCSMCLAMNADKLKP
GERCASTSNRNFEGRQGRGGRTHLVSPGMAAAAAISGNLDDVRKYQN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaactctttacgataaaatttggaatgatcatttagtagatcaacaagatgat
ggtacagcactattatttgttgatcgacatttagtacatgaagtaacaagcccacaagct
tttgaaggattaagaaactctaatagaaaagttagacaacctggcttaacactagcagtt
gcagaccataatgttccaactactgatagatctaaaggaatagcggatgcagagtctaaa
attcaagtagataccttagaaagcaattgtaaggaatttggagttcaatatttaggaatg
aatgacaagagacaaggaattgttcacataattggtccagaacaaggttttacacaacct
ggtacagtaattgtttgtggagatagccacacagcaacacatggtgcatttggtgctttg
gcatttggaattgggacctcagaagtagaacatgttctagcaacacaaacattagttcaa
aaaaaagcaaaaaattttagaatcaatgttaacggaaaacttcctattggagttacctct
aaagatgtaatcttgcaaattataggacagattggaactgcgggaggaacaggatcagtt
attgagtatgccggcagtctaatttcatctttaagcgtagagcaacgaatgactatttgc
aatatgactattgaaggaggagcaagagcagggttaattgctcctgatgaaaaaatattt
gaatatttaaagggtaaaccgatgtctccaaaaaatgaaaattgggataaggctatgaaa
tattgggaaagtttaaaaactgatgatggagctaaatttgataaagaaatcaacttagtt
gcagaagatattttaccgatgattacttggggaacctctccacaagatgtaatcactata
gatggcaaagttccaaatcctaaaaatgaacaggatgaagataaaaagaactctttagaa
agatcattaaattatatgggcttaaaagctgatacactagctacagatattaagattgat
aaggttttcataggaagttgtacaaatggtagaattgaagatttaagggaagctgccaaa
atattaaaagataaaaagaaagcgtcccatgttcaggcaatggttgttccgggctcaggt
ttggttaaagaacaagcagagcaggaaggtttagataaaatatttatagcttcaggtttt
gaatggagagagcctggctgttctatgtgtcttgccatgaatgctgataaattaaaacca
ggagaaagatgcgcctcaacttcaaacagaaactttgaaggaagacaaggtagaggtgga
agaacacatttagtaagtcctggaatggcagctgcagctgcaatttctggaaacttagat
gatgttagaaagtatcaaaactaa
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