Candidatus Pelagibacter ubique: SAR11_0278
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Entry
SAR11_0278 CDS
T00257
Symbol
glcD
Name
(GenBank) (S)-2-hydroxy-acid oxidase
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00630
Glyoxylate and dicarboxylate metabolism
pub01100
Metabolic pathways
pub01110
Biosynthesis of secondary metabolites
pub01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAR11_0278 (glcD)
Enzymes [BR:
pub01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
SAR11_0278 (glcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
PadR
Motif
Other DBs
NCBI-ProteinID:
AAZ21099
UniProt:
Q4FNZ0
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All DBs
Position
complement(280945..282441)
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AA seq
498 aa
AA seq
DB search
MSELVLPKIDKATINKKEYIFKNLAKIINPENVLSHADDIKPYETDALAAYTQTPLAVVM
PENTEEVSNILKFCHKENIKVVPRGAGTGLSGGALPLNDAILLSLGKFNKIIEIDFENKC
VVTQPGVTNLGITHAVQHKNFYYAPDPSSQLACSIGGNVAENSGGVHSLKYGTTTNNILG
VEMVMMDGTVCRVGGKTLDQEGYDLMGLICGSEGLLGVITEVTVKILKNPQVVKAALIGF
PTIEEGGNAASEIISSGIVPAGMEIMDKALIEATDNFSKAGYPRDAELLLIVELDGTESE
VDELLKQVRSICEKNNCSSLKLSKNEKERLSFWAGRKAAFPACGAMAPDYYCMDGSIPRG
KLAEALLEIKRLSEKYKLPVANCFHAGDGNLHPLIMFDGSDKEQLRKTEEFGAEILKTCV
RLGGVITGEHGVGVEKRELMCEMFNNTDIQQQLDIKKSLDEKNLLNPGKVYPILRKCAEE
GRVHVHRNEEKFPDLPRF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattagttctgccaaagattgacaaagcaacgatcaataaaaaagaatatatt
tttaaaaatcttgctaaaattatcaatccagaaaatgttttaagtcatgcagatgatatt
aaaccatatgaaactgatgcattagcagcttacacacaaacaccactagctgttgtgatg
ccggaaaatactgaagaagtaagtaatatcttaaagttttgccataaagaaaatattaaa
gttgtaccaagaggtgctggcactggtctttcagggggagctctacctttaaatgatgca
attttattaagtcttggaaaatttaacaaaattatagaaattgattttgaaaataaatgt
gtagtaacccaacctggtgtaacaaacttaggaataacacatgccgtacaacataaaaat
ttttattatgcaccagacccatcaagtcaacttgcatgctcaatagggggtaatgttgct
gaaaattctggaggcgtccattctctaaaatatggaacgacaactaataatattttaggt
gttgaaatggtaatgatggatggaacagtttgtagagttggtggaaaaactcttgatcaa
gaagggtatgatctaatgggattaatttgtggttcagaaggattattaggagtgattact
gaagtgacagtaaaaattttaaaaaaccctcaagtcgttaaagcagcgctaataggcttt
ccaacaattgaagaaggtggaaacgcagcatcagaaataatttcaagtggaattgttcca
gcaggtatggaaataatggataaagctttgatagaggcaacagataattttagtaaagca
ggatatccaagagatgcagagcttttattaattgtagaattagatggaaccgaatctgag
gtagatgaattattaaaacaagtcagaagtatttgtgaaaaaaataattgctcaagttta
aaattgagtaaaaatgaaaaagaaagactatcattttgggcaggtagaaaagcagcattt
ccagcatgtggagctatggcaccagattattattgtatggacggatccataccaagagga
aaacttgcggaagctttacttgaaataaaaagactttctgaaaaatacaaattacctgta
gcaaattgttttcatgcaggagatggaaatttacatccattaataatgtttgatggaagt
gataaagaacaactgcgaaaaacagaggaatttggagctgagatactaaagacgtgcgtt
agattagggggagtgatcactggagagcatggggtaggagtagaaaaaagagaactaatg
tgtgagatgtttaataatacagatattcaacaacaattagatattaaaaaatcgcttgat
gaaaaaaatttactaaacccaggaaaagtttatccaatattaagaaaatgtgcagaggaa
ggaagggtacatgtccacagaaatgaagaaaaattcccagatcttccaagattctaa
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