Candidatus Pelagibacter ubique: SAR11_0298
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Entry
SAR11_0298 CDS
T00257
Name
(GenBank) DNA photolyase-like protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_0298
Enzymes [BR:
pub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAR11_0298
DNA repair and recombination proteins [BR:
pub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAR11_0298
Prokaryotic type
SAR11_0298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
5_nucleotid_C
OGT_N
Motif
Other DBs
NCBI-ProteinID:
AAZ21119
UniProt:
Q4FNX0
LinkDB
All DBs
Position
296040..297182
Genome browser
AA seq
380 aa
AA seq
DB search
MIFEASRAKAVDKLNTFVEQNLSDYSKLRNFDFGPSNRSNVSCLSPYITHGIINELEVIN
KSLKKFSFANNEKFIQEVLWHVYWKGWLELRPDVWSDYLIELDKIKKEFKNNQSYLDATE
GKTNVDCFNQWVSELKENNYLHNHTRMWFASIWIFTLELPWQLGAEFFMQHLYDGDAASN
TLGWRWVAGIQTQGKHYLASEWNINKFTNNRFKNIKLNENAKPISNDKIYSVISKGFKNS
EILEDKTLLIFENNMTFEFSDFKEHKFKKILLVSNKTDRTIKLSEKVLKFKANLLEDQKI
RLKEKSINCETINTNDLKNITEEVYALYPTVGENLNFIQNNQLKNIRFLYRKLDQFSWQY
CNKGFFNFKNYIPKIIANFN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgaagcttcaagggctaaagccgttgataaattaaatacttttgttgaacaa
aatctttcagattattcaaaactaagaaattttgattttgggcctagtaatagatctaat
gtttcttgtttatccccctatataactcacggaataattaatgaattagaagtaattaat
aaatctcttaaaaagttttcatttgcaaataatgaaaaatttattcaggaagttctttgg
catgtttattggaaaggttggctagaactaagacctgatgtttggtcagattacttaata
gaattagataaaattaaaaaagaatttaaaaacaatcaaagttatttggatgcaacagaa
ggaaaaacaaatgtagattgttttaatcaatgggtaagtgaacttaaagaaaacaattat
cttcataaccacacaagaatgtggtttgctagcatttggatttttacactagaattacca
tggcagttgggagctgagttttttatgcaacatctatatgatggggatgctgcatcaaat
acccttggttggagatgggttgctggcattcaaactcaaggcaagcattaccttgcaagt
gaatggaatataaataaatttacaaataatagatttaaaaacataaaacttaatgaaaat
gccaaacctatatccaatgataagatatattctgttattagcaaaggctttaaaaattct
gagattttggaagataaaactttattaatatttgaaaataatatgacatttgaattttct
gattttaaagaacataagtttaaaaaaattttgttagtctcaaataaaacagatagaact
atcaaattaagtgaaaaggtgttgaaatttaaagcaaatcttttagaggatcaaaaaata
agattgaaagaaaaatcaataaattgtgaaactattaacactaatgatttaaaaaatatt
accgaagaagtttatgcgctttatccaaccgttggtgaaaatttaaattttattcaaaat
aatcaattaaaaaatataagatttttatatagaaagttggatcagttttcttggcaatat
tgtaataaaggtttttttaattttaaaaactatattccaaaaattattgctaattttaat
taa
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