Candidatus Pelagibacter ubique: SAR11_0309
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Entry
SAR11_0309 CDS
T00257
Symbol
hemD
Name
(GenBank) Uroporphyrinogen III synthase HEM4
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00860
Porphyrin metabolism
pub01100
Metabolic pathways
pub01110
Biosynthesis of secondary metabolites
pub01120
Microbial metabolism in diverse environments
pub01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SAR11_0309 (hemD)
Enzymes [BR:
pub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
SAR11_0309 (hemD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AAZ21131
UniProt:
Q4FNV8
LinkDB
All DBs
Position
complement(305935..306633)
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AA seq
232 aa
AA seq
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MHILFTRPLEDCHEMILKFQSLGHEISHLPLINIEGLKYEAPNYSEFKAIIFTSANAVKF
LDIKNIDKKLKCFCVGSATEKKARSVGFQNVFAAEGNVSNLKELILQNFKPSDGKLIYIS
GEIISSDLDKELISSGYTIERLINYRANPIEKYDESFIEKLKLKMPEITYIYSQNSAINF
LKVIKNYQLETLWMNTNLMCIGEKTSSILNEIKWKKIFLFNPGEEEFLLYKI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttattcacaagacctctagaagattgtcatgaaatgatattaaaatttcaa
tcattgggtcatgaaatatctcatttacctttaattaatattgaaggtttaaaatacgaa
gcaccaaactattcggagtttaaagcaattatttttaccagtgctaatgctgttaaattt
ttggatattaagaacattgataaaaaattaaaatgcttttgtgttggaagtgctactgaa
aaaaaagccagaagtgttggttttcaaaatgtttttgcagctgaaggaaatgttagtaat
cttaaggaattaatcttgcaaaattttaaaccttctgatggaaagctaatttatataagt
ggagagataatctctagtgatttggacaaagagcttatttcgagtgggtatacgatagaa
cgattaattaattacagagctaacccaattgaaaaatacgatgaaagctttatcgaaaaa
ttaaaattaaaaatgcctgaaattacttacatttattcgcaaaatagtgcgattaatttt
ttaaaagtaattaaaaattatcagttagaaaccctatggatgaatactaatttaatgtgc
attggagaaaaaacctcttcaattcttaatgaaataaagtggaaaaaaatttttcttttt
aaccctggagaagaggaatttttgctatataaaatttag
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