Candidatus Pelagibacter ubique: SAR11_0411
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Entry
SAR11_0411 CDS
T00257
Symbol
dnaN
Name
(GenBank) DNA polymerase III
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub03030
DNA replication
pub03430
Mismatch repair
pub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAR11_0411 (dnaN)
03430 Mismatch repair
SAR11_0411 (dnaN)
03440 Homologous recombination
SAR11_0411 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pub03032
]
SAR11_0411 (dnaN)
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_0411 (dnaN)
Enzymes [BR:
pub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAR11_0411 (dnaN)
DNA replication proteins [BR:
pub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAR11_0411 (dnaN)
DNA repair and recombination proteins [BR:
pub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAR11_0411 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_3
DNA_pol3_beta_2
DNA_pol3_beta
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
AAZ21232
UniProt:
Q4FNK7
LinkDB
All DBs
Position
400461..401351
Genome browser
AA seq
296 aa
AA seq
DB search
MYDIIRKFSSGKKINLSLTDVSKLQVESEKSVFNLNCISASEFPLTDENFNQNEFSIKSK
QLLKLLNKCKFSVSNDETRHYLSGIFFHQTQTEDKNFLTAAATDSHRMSISKIRLDQQVD
FEPIILPKKTIFQLCSLLESYDGDVKISNIKSKIKFELNNSILISKLIDGKFPNYIQVIP
KNNQKKLEIDLKLFLDSVDRVASVSLDKKDGVKFNLSKDVLNLSVNNTNSGDGKESLTVK
FDHDLEISFNSRYLIDVASQLDGDKIEIFFNDTGSPALIKDPGDFDSIFVVMPMKG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacatcataagaaaattttcgtcaggaaaaaaaattaatttatctttaacagac
gttagcaaactccaagttgagtctgaaaaatctgtttttaatttaaattgtattagtgca
tctgagtttccactaacagatgaaaactttaatcaaaatgaattttctataaaatcaaaa
caattattgaaattattaaataaatgtaaattttcagtttcaaatgatgaaacaagacac
tatttaagtggaattttttttcatcaaacacaaactgaagataaaaattttttaacagca
gcagctacagacagtcatagaatgtctatttcaaaaataagattagaccagcaagtagat
tttgaaccaataatacttcctaaaaaaacaatttttcaactatgctcattgttagaaagt
tatgatggcgatgttaaaatttcaaatattaaatctaaaataaaatttgaattaaataat
agtatattaatatctaagttaattgatgggaaatttccaaattatattcaggtaatacct
aagaataatcaaaagaagttagaaatagatttaaaattatttttagactctgttgatcga
gttgcttcagtttcattagataaaaaagatggagttaaatttaatttgtcaaaagatgtt
ttaaacttatcagttaacaacacaaatagtggtgatggaaaagaaagtttaactgtaaag
tttgatcatgatctagaaataagttttaattctagatatttaattgatgtagcatcacaa
cttgatggagataagattgaaatttttttcaatgatactgggtctccggcattaattaaa
gatccaggcgattttgacagtatatttgttgtaatgcctatgaaaggctag
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