KEGG   Candidatus Pelagibacter ubique: SAR11_0413
Entry
SAR11_0413        CDS       T00257                                 
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pub  Candidatus Pelagibacter ubique
Pathway
pub00300  Lysine biosynthesis
pub00470  D-Amino acid metabolism
pub01100  Metabolic pathways
pub01110  Biosynthesis of secondary metabolites
pub01120  Microbial metabolism in diverse environments
pub01230  Biosynthesis of amino acids
Module
pub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SAR11_0413 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SAR11_0413 (lysA)
Enzymes [BR:pub01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SAR11_0413 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AAZ21234
UniProt: Q4FNK5
LinkDB
Position
complement(402062..403276)
AA seq 404 aa
MKYIKKNLTIEKVNVQKIAKKFGTPTYCYSHKRLTENIKNFKKNFSSFSPLICFAVKSNT
NVNLIREIRKLGLGADVVSMGELMMALKAGIDPKKIVFSGVGKTSKEISYAIDKKILLIN
AESKSEIIEIEKIAKSKKKIVNIGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVN
FTNHSKNINLKCLSVHIGSQILDHKPYEKMLSVVNKIIKKSGHIFEFIDLGGGMGISYEK
NSKKLNYQKYNTAIQKFLKGQKTKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFIILDA
AMNDLMRPALYGANHQTIPVVKNNRISNKTYEFVGPICESTDKFTTIKGFQKLKEKDLVL
MCDVGAYGMSLSSNYNVRPKPAELIIKGSKINIIKKRQKLKDLI
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaaatatataaagaaaaacttaacaattgaaaaagttaatgttcaaaaaatagcaaaa
aagtttggtacaccaacttattgttattcgcacaaacggctaacagaaaatataaaaaat
tttaaaaaaaattttagctccttttctccattgatttgttttgctgtcaaatccaatact
aatgtaaatctgataagagaaattagaaaattagggctaggtgctgatgttgtttcaatg
ggtgagttaatgatggctctaaaagcaggtatagacccaaaaaaaattgttttttcgggc
gtgggtaaaacttcaaaagaaataagttatgcaattgataaaaaaattttattaataaat
gctgagtctaaaagtgaaattattgaaattgaaaaaattgcaaaatcaaaaaaaaaaata
gttaatataggtattagacttaatccaaatacagatgctaagacattaaaacaaatttca
actggaaaaaaagaaaataaatttggtgtagatgaaaaaactttttttgaattagtaaat
tttacaaatcattctaaaaatattaaccttaaatgcttaagtgttcatattggtagtcaa
attttagatcacaaaccatatgaaaaaatgctcagtgtagtgaataaaataataaaaaaa
agtggccatatctttgaatttattgatctaggtggaggcatgggtatttcttatgagaaa
aatagcaaaaaacttaactatcaaaaatataacactgctatacaaaaatttctaaagggc
caaaaaacaaaaataatatttgaacctggtcgatctatagttggtaatattggattttta
atttctcaagttatttatataaaagaaaataccaaaaaagatttcatcatattagatgct
gcaatgaatgatcttatgagaccagcattatatggtgcaaatcatcaaactatacctgta
gtaaaaaataatagaatttcaaacaaaacttatgaatttgtaggaccaatttgtgaaagt
acagacaaatttacaactataaaaggttttcagaaattaaaagaaaaagatcttgtgcta
atgtgtgatgttggagcttatggaatgtcactaagctcaaattacaatgtaagaccaaaa
ccagcagaattaataattaaaggatcaaagattaatattattaaaaaaagacaaaaacta
aaagatttgatttag

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