Candidatus Pelagibacter ubique: SAR11_0490
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Entry
SAR11_0490 CDS
T00257
Symbol
pyrF
Name
(GenBank) Orotidine 5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00240
Pyrimidine metabolism
pub01100
Metabolic pathways
pub01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SAR11_0490 (pyrF)
Enzymes [BR:
pub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
SAR11_0490 (pyrF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMPdecase
PsbP
DUF7695
AnkX_ins
Motif
Other DBs
NCBI-ProteinID:
AAZ21312
UniProt:
Q4FNC7
LinkDB
All DBs
Position
complement(478984..479676)
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AA seq
230 aa
AA seq
DB search
MMNKNIFVACDTSSLKEIKKIISDTKTNKLQIIPKFGLQFFYSKSGRAFLQNFKRDYFLD
LKINDIPQTALSAMDSLKDLKKCKYITVHVSGGLEMLKAITKKAKSINKNLKVLGVTILT
SLNKKSLEEIGHTKTVEQLVLKQAGLIKKSGAAGIVCSAQEAKIVRKKYKNLFIVTPGIR
LPGDDANDQSRVMTPNDAFKNKVSGIVMGRSLIKGNIKNNIKRLINHLNQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataaaaatatctttgttgcttgtgatacatcaagcttaaaagaaataaaaaaa
ataattagcgatacgaaaactaataaacttcaaataattccaaaatttggcttacagttc
ttttattcaaaaagtgggagagcttttcttcaaaattttaagagagattatttcttagat
ttaaaaataaatgatattccacaaactgctttatctgcaatggatagtttaaaagattta
aagaaatgtaaatatattacagttcatgtaagcggtggccttgaaatgcttaaagctatt
acaaaaaaagctaaatcaattaacaaaaatttaaaagtattaggagttacaattttaaca
agccttaacaaaaaatctcttgaagaaattggtcacaccaagaccgtagagcagctagta
ttaaaacaagctggtcttataaaaaaatcaggtgcagctggaattgtgtgttctgcacaa
gaagcaaaaatagttaggaaaaaatacaaaaatttatttattgttacgccaggaataagg
ctacctggagatgatgcaaatgatcaatctagagtaatgactcctaatgatgcttttaaa
aataaagtttctggtattgtaatgggaaggtcattaataaagggtaatatcaaaaacaac
attaaaagattaattaatcacttaaatcaatga
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