Candidatus Pelagibacter ubique: SAR11_0722
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Entry
SAR11_0722 CDS
T00257
Symbol
aspS
Name
(GenBank) asparaginyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAR11_0722 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pub01007
]
SAR11_0722 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pub03016
]
SAR11_0722 (aspS)
03029 Mitochondrial biogenesis [BR:
pub03029
]
SAR11_0722 (aspS)
Enzymes [BR:
pub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SAR11_0722 (aspS)
Amino acid related enzymes [BR:
pub01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAR11_0722 (aspS)
Transfer RNA biogenesis [BR:
pub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAR11_0722 (aspS)
Prokaryotic type
Other AARSs
SAR11_0722 (aspS)
Mitochondrial biogenesis [BR:
pub03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SAR11_0722 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA_anti-like
Adeno_terminal
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AAZ21541
UniProt:
Q4FMP8
LinkDB
All DBs
Position
705131..706915
Genome browser
AA seq
594 aa
AA seq
DB search
MNKYRTHTCSELTIDSRGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNQNFN
SLEKIQLESVIKINGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY
AEEIRLKYRFLDLRRKKIHDNIILRSKVISFIRSEMSKLGFLEFQTPILTSSSPEGARDF
LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE
MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS
DLSNIFIRDDVTFEIFKKLVKSGSKVRCIVTKNTKDKPRSFFDNIDKWAKEQGASGLAYF
TIEKEENISARGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLARDKIA
KDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNIKAYQ
YDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHGGIAP
GIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLALKLKK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatatagaacacatacatgtagtgagttaacaatagatagtaggggtaaagat
gttgttttatcaggctggataaacaaaaaacgagatcatggaaatttactgttcatagat
ttaagagacaattatggaatgactcaatgcatcatagataaaagtaaccaaaattttaat
tcattagaaaaaattcaattagaaagcgtaatcaagataaatggtaaggttgtagagaga
acaaaagaaactattaacaccgatcttcaaactggagagattgaagttaatataaattca
tttgaagtactgggtacttgcaaagagttaccaatgccagtttttagtgatcaagagtat
gctgaagaaattagactcaagtatagattcttagatctaagaagaaaaaaaattcatgac
aatattattttaaggtcaaaagttatctcttttattagaagcgagatgtctaaacttggg
tttttggaattccaaacaccaatattaacatcctctagccctgaaggtgcaagagatttt
ttagtaccaagtagactaaatcctggaaaattttatgcactgccacaagcgccacaacaa
tttaagcaacttataatggtttctggttttgataaatattttcaaatagctccatgcttt
agagatgaagatgcaagggcagatagaagtccaggtgaattttatcagcttgatttagaa
atgtcttttgttgaacaagaagatgtctttcaagttgttgaaaaactaatagtcaatgtt
tttaaaaaattttctgaaaaaaaattgatgtatgaaaaatttccaagaataccttatgag
gaatctatgcttaagtatggatcagataagccagatttaagaaacccattaataatttca
gatttatcaaacatttttatacgtgatgatgttacgtttgagatatttaaaaagcttgta
aaatctggttctaaagtgagatgtatagtaacaaaaaatacaaaagataaacctaggagt
ttttttgataatattgataagtgggcaaaagaacaaggggcgtctggtcttgcttatttt
acaattgaaaaagaagaaaatatttcagcaagaggaccggtgggaaaatttttttctaaa
gaagcactagaggaaattatgaaaatcactggagctgaaataggggatagtatatttttt
gcttgtggaaaaataaatgatgttgaaaaaataacctctttagctagagataaaattgct
aaagatttaaaattaattgatgaaaatactttcgcattttgttgggttgttgattatcca
atgtttgaaaaaaatgaagtaactaataaaattgaatttagtcacaatccattttcaatg
cctcaaggagacttaaaagatattgattttgataatcctcttaatattaaagcctaccag
tacgatattgtttgcaatgggatagagctatcttcaggtgcaattagaaatcacgtgcca
gaattaatgtataagcttttctcgattgctggatatcaaaaagaacaagttgatgaaaaa
tttagtggaatgatcaatgctttaagttatggagccccacctcatggtggtatagcacct
ggtatcgatagaattgtaatgctattagcaaatgaaaagaatattagagaagttacaatg
ttcccaatgaatcaaaatgctcaagacttaatgatgaacgctccatcaaacgttaacgaa
gagcaacttaaagagcttggtttagctttaaaactgaaaaaataa
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