Candidatus Pelagibacter ubique: SAR11_0766
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Entry
SAR11_0766 CDS
T00257
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NAD(P))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00250
Alanine, aspartate and glutamate metabolism
pub00310
Lysine degradation
pub00350
Tyrosine metabolism
pub00650
Butanoate metabolism
pub00760
Nicotinate and nicotinamide metabolism
pub01100
Metabolic pathways
pub01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAR11_0766 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAR11_0766 (gabD)
00310 Lysine degradation
SAR11_0766 (gabD)
00350 Tyrosine metabolism
SAR11_0766 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SAR11_0766 (gabD)
Enzymes [BR:
pub01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SAR11_0766 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SAR11_0766 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SAR11_0766 (gabD)
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Paralog
GFIT
Motif
Pfam:
Aldedh
GDYXXLXY
Motif
Other DBs
NCBI-ProteinID:
AAZ21584
UniProt:
Q4FMK5
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All DBs
Position
742383..743825
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AA seq
480 aa
AA seq
DB search
MYEKFGQFIDGNWSPSSNKETYKVINPATEEVLGHASKATPVDVDRALKSAEKGLAIWRK
TPPWQRAYTLRKIADMVREKKDVLAKWMTLENGKPLAEGVGETNGAADIFEWNAEETKRI
YGQIVESRFEDTRVHVYYQPIGVVAALSPWNFPLVLAARKISTALAAGCSVIIKPDTITP
GVVMELVDICRECGIPAGVVNLLSGDPPAIASQLISSDIIKKISVTGSTRVGKIILKQAA
DKLQRVTMELSGHSPFIVFDDADLNKATDIAIAAKFRNNGQVCISPNRFYIQESKKDEFV
GLFIEKTKKLKIGNGMDPDTQLGPLTTQKRLNEVEELVEKTKQEGAKVLLGGKRPAGFNK
GFYYEPTVFDDVKDDFTIMKQEPFGPLVPMLSFKSFDEVIERANDNDLGLCSYICTNSMD
KAYRASELMEAGIACVNTGVVAVAEAPFGGIKQTGYGREGGSNAIKDYLNVKYTHMGIKG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaaaatttggacaatttatcgatggcaattggtcgccctcttctaacaaggaa
acttataaagttatcaatcctgcaacagaagaagttttaggccacgcttcaaaagcaaca
cctgttgatgtggatagagcattaaaatctgcagaaaagggattagctatttggagaaaa
actccaccatggcaaagagcttatacgcttagaaaaattgctgacatggtaagagaaaaa
aaagatgtacttgctaaatggatgactttagaaaatggaaaacctttagcagaaggtgtt
ggtgaaacgaatggtgctgcagatatttttgaatggaatgctgaagagacaaaaagaatt
tatggacaaattgtagaaagtagatttgaagacacgagagtgcatgtttattatcaaccg
attggagtagtggctgctttgtcaccttggaattttccacttgtattagctgctagaaaa
atttctacagcattagctgcgggctgttcagtaattatcaagccagacacaattacacca
ggtgtggttatggaattagtcgatatttgtagggaatgcggaatacccgctggtgtagtt
aatcttttgtcaggtgatccacctgcaattgcgtcacaattaatttcatctgatattatt
aaaaaaatctcagttacaggctcaactagagttggtaaaataattttaaaacaagctgca
gataaattacaaagagtaacaatggagttaagtggtcattctcctttcattgtatttgat
gatgctgatttaaataaagcaacggacatagctattgctgctaaatttagaaataatggt
caagtttgtatttcacctaatagattttacattcaggaaagtaaaaaagatgagttcgtt
ggtttatttattgaaaaaactaaaaaacttaagattggtaatggtatggatccagataca
caactaggaccgttaacaacgcaaaaaagactaaatgaagttgaagagctagttgaaaaa
acgaaacaagaaggagctaaagttttattgggaggtaagaggcctgcaggatttaataaa
ggtttttattatgagccaactgtttttgatgatgttaaagatgactttacgatcatgaaa
caagaaccatttgggccattagttccaatgctgtcatttaaatcttttgatgaagttatt
gaaagagcaaatgataatgatttaggtctttgtagttatatttgtactaattcaatggat
aaagcttatagagcctctgaattaatggaagcaggcattgcttgtgtgaatactggtgtt
gtagcagttgcagaagctccatttggtggaataaaacaaactggctatggtagagaaggt
ggctctaacgcaattaaagattatctaaatgttaaatatactcatatgggtattaagggc
tag
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